Home

IGVFDS7129ASVR

preview
This object is in preview status. Metadata is subject to change until this object is released.
File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 44.0 years) peripheral blood mononuclear cell; ... and 15 more samples
Protocols
Aliases
jimmie-ye:XX21-SC4_snRNA

Sequencing Results (Illumina)

8 items
Read Names
fastq
reads
I2
345
2.1 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
344
Read 1
19 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
344
Read 2
16 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
344
1.9 GB
Jimmie Ye, UCSF
validated
fastq
reads
I2
344
2.1 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
345
Read 2
16 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
345
Read 1
19 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
345
1.8 GB
Jimmie Ye, UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 44.0 years) peripheral blood mononuclear cell; ... and 15 more samples

Donors

17 items
Aliases
  • jimmie-ye:donor_330
male
Homo sapiens
  • jimmie-ye:donor_107
female
Homo sapiens
  • jimmie-ye:donor_135
male
Homo sapiens
  • jimmie-ye:donor_138
male
Homo sapiens
  • jimmie-ye:donor_86
female
Homo sapiens
  • jimmie-ye:donor_112
male
Homo sapiens
  • jimmie-ye:donor_350
female
Homo sapiens
  • jimmie-ye:donor_183
male
Homo sapiens
  • jimmie-ye:donor_338
female
Homo sapiens
  • jimmie-ye:donor_234
female
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • jimmie-ye:XX21-SC4_snATAC
Jimmie Ye, UCSF

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF