{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS6991WMGS/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS6991WMGS",
"aliases": [
"igvf:corces_measurementSet_RP008_G8_RNA"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [87d488ba-ef89-494c-8024-bee2b8535732](/phenotypic-features/87d488ba-ef89-494c-8024-bee2b8535732/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [5d86271f-e200-458e-b626-d45775c1f778](/phenotypic-features/5d86271f-e200-458e-b626-d45775c1f778/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [0165d0f4-b610-4164-9bc3-08dc74af02b3](/phenotypic-features/0165d0f4-b610-4164-9bc3-08dc74af02b3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [633cb08c-78bd-4268-b5d8-b893a02d26f8](/phenotypic-features/633cb08c-78bd-4268-b5d8-b893a02d26f8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [3a8f2048-d423-49dc-872f-a2d52489895c](/phenotypic-features/3a8f2048-d423-49dc-872f-a2d52489895c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [f57b6265-94b7-4979-be4c-73ef23b5faba](/phenotypic-features/f57b6265-94b7-4979-be4c-73ef23b5faba/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2848YHMH](/human-donors/IGVFDO2848YHMH/) has in progress subobject phenotypic feature [f481e666-7b16-4e9b-ba1b-a05493449ec5](/phenotypic-features/f481e666-7b16-4e9b-ba1b-a05493449ec5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2848YHMH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2848YHMH](/human-donors/IGVFDO2848YHMH/) has in progress subobject phenotypic feature [3c37d880-9919-4b08-abae-044032116c62](/phenotypic-features/3c37d880-9919-4b08-abae-044032116c62/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2848YHMH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2848YHMH](/human-donors/IGVFDO2848YHMH/) has in progress subobject phenotypic feature [a8beb932-f613-4205-93dc-0f753c74180b](/phenotypic-features/a8beb932-f613-4205-93dc-0f753c74180b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2848YHMH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2848YHMH](/human-donors/IGVFDO2848YHMH/) has in progress subobject phenotypic feature [994a7c3a-8577-4f5e-afa8-c2feb9095ae9](/phenotypic-features/994a7c3a-8577-4f5e-afa8-c2feb9095ae9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2848YHMH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2848YHMH](/human-donors/IGVFDO2848YHMH/) has in progress subobject phenotypic feature [6676b2aa-16ac-43ea-827f-b5c60a5c7c2c](/phenotypic-features/6676b2aa-16ac-43ea-827f-b5c60a5c7c2c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2848YHMH/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [46b3e3ac-e90e-4f3c-8941-5af5fceb9b99](/phenotypic-features/46b3e3ac-e90e-4f3c-8941-5af5fceb9b99/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [ab0c4c39-15a5-415a-891b-05411b5bdfc6](/phenotypic-features/ab0c4c39-15a5-415a-891b-05411b5bdfc6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [1ef24011-d1f8-48ff-9e1f-555e57610cd6](/phenotypic-features/1ef24011-d1f8-48ff-9e1f-555e57610cd6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [d0628ba8-dcc8-4c05-bf8e-08dbbb919b2f](/phenotypic-features/d0628ba8-dcc8-4c05-bf8e-08dbbb919b2f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [5df41812-ca61-438a-8942-0827a98215bf](/phenotypic-features/5df41812-ca61-438a-8942-0827a98215bf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [eb56d44e-c3b9-4e22-aff7-d12c6ac5fa85](/phenotypic-features/eb56d44e-c3b9-4e22-aff7-d12c6ac5fa85/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5194SXHC](/human-donors/IGVFDO5194SXHC/) has in progress subobject phenotypic feature [56bca94c-e5cb-4bd1-b90a-9977dedaa882](/phenotypic-features/56bca94c-e5cb-4bd1-b90a-9977dedaa882/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5194SXHC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5194SXHC](/human-donors/IGVFDO5194SXHC/) has in progress subobject phenotypic feature [089d8c0e-3573-4f1a-a25e-68c9e9178176](/phenotypic-features/089d8c0e-3573-4f1a-a25e-68c9e9178176/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5194SXHC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5194SXHC](/human-donors/IGVFDO5194SXHC/) has in progress subobject phenotypic feature [a6b0187e-c51c-447e-866d-b3e071ab31a3](/phenotypic-features/a6b0187e-c51c-447e-866d-b3e071ab31a3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5194SXHC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5194SXHC](/human-donors/IGVFDO5194SXHC/) has in progress subobject phenotypic feature [b47cc28c-d555-41de-a0dc-7781d0884be0](/phenotypic-features/b47cc28c-d555-41de-a0dc-7781d0884be0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5194SXHC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5194SXHC](/human-donors/IGVFDO5194SXHC/) has in progress subobject phenotypic feature [ee18415f-0f87-45dc-b22c-da8f3ea2b325](/phenotypic-features/ee18415f-0f87-45dc-b22c-da8f3ea2b325/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5194SXHC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5194SXHC](/human-donors/IGVFDO5194SXHC/) has in progress subobject phenotypic feature [359e56f1-634f-4096-b79c-f872a8108e1c](/phenotypic-features/359e56f1-634f-4096-b79c-f872a8108e1c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5194SXHC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [e40b23ca-8049-458d-9daa-2d9a7bfe205d](/phenotypic-features/e40b23ca-8049-458d-9daa-2d9a7bfe205d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [bf9c75cf-8f7f-44ab-ab3e-d796bc759162](/phenotypic-features/bf9c75cf-8f7f-44ab-ab3e-d796bc759162/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1278CNID](/human-donors/IGVFDO1278CNID/) has in progress subobject phenotypic feature [0ffc3098-10e0-4829-bbfd-b484f751c849](/phenotypic-features/0ffc3098-10e0-4829-bbfd-b484f751c849/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1278CNID/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [39593b92-86ab-4512-ae6a-c5a8c8473cf4](/phenotypic-features/39593b92-86ab-4512-ae6a-c5a8c8473cf4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [eb1dccc8-a9b4-40ca-9e10-bf67678c6cc5](/phenotypic-features/eb1dccc8-a9b4-40ca-9e10-bf67678c6cc5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [933de8aa-498d-45bb-9b95-cf15aa70af80](/phenotypic-features/933de8aa-498d-45bb-9b95-cf15aa70af80/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [30873f1f-93e3-45fa-b813-7a7c9c420ed2](/phenotypic-features/30873f1f-93e3-45fa-b813-7a7c9c420ed2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [89a557dc-535c-4a80-b083-6a6fd0ab31e8](/phenotypic-features/89a557dc-535c-4a80-b083-6a6fd0ab31e8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8046LKFZ](/human-donors/IGVFDO8046LKFZ/) has in progress subobject phenotypic feature [ee30cf86-da5d-443e-a7f7-9fcad693a6f5](/phenotypic-features/ee30cf86-da5d-443e-a7f7-9fcad693a6f5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8046LKFZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [f2944cd8-3e11-46e3-8dd8-a60165632a59](/phenotypic-features/f2944cd8-3e11-46e3-8dd8-a60165632a59/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [16dd0641-17b5-4e28-8df8-c1557d69956e](/phenotypic-features/16dd0641-17b5-4e28-8df8-c1557d69956e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [3ea18406-059b-4181-ad35-c617adcf8f07](/phenotypic-features/3ea18406-059b-4181-ad35-c617adcf8f07/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1997RFPJ](/human-donors/IGVFDO1997RFPJ/) has in progress subobject phenotypic feature [0130d925-ca8e-441c-a725-9525a350da63](/phenotypic-features/0130d925-ca8e-441c-a725-9525a350da63/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1997RFPJ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [ef944fd3-8635-4e0f-bad8-48136e7c6408](/phenotypic-features/ef944fd3-8635-4e0f-bad8-48136e7c6408/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [d900f184-9bf7-4b9c-8d20-0d40c6b16435](/phenotypic-features/d900f184-9bf7-4b9c-8d20-0d40c6b16435/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [1961d5fc-9987-47f0-8cdf-9dae2203185c](/phenotypic-features/1961d5fc-9987-47f0-8cdf-9dae2203185c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [025a53bb-7c23-42cb-9752-3516f17f6187](/phenotypic-features/025a53bb-7c23-42cb-9752-3516f17f6187/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [cd2525eb-a90d-47c1-a053-cd3376cd23d1](/phenotypic-features/cd2525eb-a90d-47c1-a053-cd3376cd23d1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8344LUQZ](/human-donors/IGVFDO8344LUQZ/) has in progress subobject phenotypic feature [93e7b543-5ab9-4cb4-8a10-9d9a7b950b6b](/phenotypic-features/93e7b543-5ab9-4cb4-8a10-9d9a7b950b6b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8344LUQZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [67b114cf-7764-4391-8fd6-ac46ac9bc7a4](/phenotypic-features/67b114cf-7764-4391-8fd6-ac46ac9bc7a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [be5d84fc-8dc2-496a-8ecf-440a2092a07c](/phenotypic-features/be5d84fc-8dc2-496a-8ecf-440a2092a07c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [9987347f-6f4d-4d82-88c9-0c4c4317a278](/phenotypic-features/9987347f-6f4d-4d82-88c9-0c4c4317a278/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [0fd0acf9-94ba-4952-9984-7d1e562d121a](/phenotypic-features/0fd0acf9-94ba-4952-9984-7d1e562d121a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [2215de1b-9e0d-47cd-a69d-7f4faf6b0976](/phenotypic-features/2215de1b-9e0d-47cd-a69d-7f4faf6b0976/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [fb128197-8fc4-4ae2-90ee-244353c5c115](/phenotypic-features/fb128197-8fc4-4ae2-90ee-244353c5c115/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7306YMGC](/human-donors/IGVFDO7306YMGC/) has in progress subobject phenotypic feature [b7d1671f-0cb9-42ce-84bf-70d7508a2dc8](/phenotypic-features/b7d1671f-0cb9-42ce-84bf-70d7508a2dc8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7306YMGC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7306YMGC](/human-donors/IGVFDO7306YMGC/) has in progress subobject phenotypic feature [52f2a871-4f9a-4125-8b75-21b86db71234](/phenotypic-features/52f2a871-4f9a-4125-8b75-21b86db71234/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7306YMGC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7306YMGC](/human-donors/IGVFDO7306YMGC/) has in progress subobject phenotypic feature [6f2ca47b-41f5-4df7-873b-985b82301aca](/phenotypic-features/6f2ca47b-41f5-4df7-873b-985b82301aca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7306YMGC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7306YMGC](/human-donors/IGVFDO7306YMGC/) has in progress subobject phenotypic feature [c2d841ed-9a79-4029-8f19-938166bb96ee](/phenotypic-features/c2d841ed-9a79-4029-8f19-938166bb96ee/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7306YMGC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7306YMGC](/human-donors/IGVFDO7306YMGC/) has in progress subobject phenotypic feature [cc8814f1-9ac1-45dc-ac47-102a624b5880](/phenotypic-features/cc8814f1-9ac1-45dc-ac47-102a624b5880/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7306YMGC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [53e177e7-37b6-4550-bef6-5c54b7039c01](/phenotypic-features/53e177e7-37b6-4550-bef6-5c54b7039c01/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [ec5a2713-387a-4247-9136-5582325519a7](/phenotypic-features/ec5a2713-387a-4247-9136-5582325519a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [a3ebe12e-cb3f-4f23-80a6-7d34274ef63b](/phenotypic-features/a3ebe12e-cb3f-4f23-80a6-7d34274ef63b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [3d726111-5f82-486e-9ba1-087d5380f9b1](/phenotypic-features/3d726111-5f82-486e-9ba1-087d5380f9b1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [9d807290-34c2-4163-92c0-e55694701c5d](/phenotypic-features/9d807290-34c2-4163-92c0-e55694701c5d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4053HEKW](/human-donors/IGVFDO4053HEKW/) has in progress subobject phenotypic feature [5c7a7ccb-86ca-436a-ad7e-1e9e0a73b257](/phenotypic-features/5c7a7ccb-86ca-436a-ad7e-1e9e0a73b257/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4053HEKW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [1baae586-6df7-4bd4-b45d-715e7c843036](/phenotypic-features/1baae586-6df7-4bd4-b45d-715e7c843036/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [f302fb2e-c140-4148-a63f-4995c94219cd](/phenotypic-features/f302fb2e-c140-4148-a63f-4995c94219cd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [3101c455-2038-49a5-9ba3-d6d44b02e1af](/phenotypic-features/3101c455-2038-49a5-9ba3-d6d44b02e1af/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [a641a480-5815-4668-9082-c3eea81343dd](/phenotypic-features/a641a480-5815-4668-9082-c3eea81343dd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [0bb4a2a6-714d-4f1b-b1ca-f553eaddf065](/phenotypic-features/0bb4a2a6-714d-4f1b-b1ca-f553eaddf065/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5410JIJT](/human-donors/IGVFDO5410JIJT/) has in progress subobject phenotypic feature [8571b362-6133-4f95-8a7d-3f8eadd9f3e7](/phenotypic-features/8571b362-6133-4f95-8a7d-3f8eadd9f3e7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5410JIJT/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS6991WMGS](/measurement-sets/IGVFDS6991WMGS/) has sequence file(s): [IGVFFI2392NGTP](/sequence-files/IGVFFI2392NGTP/), [IGVFFI5854EPXZ](/sequence-files/IGVFFI5854EPXZ/), [IGVFFI2158NDLP](/sequence-files/IGVFFI2158NDLP/), [IGVFFI6016DKST](/sequence-files/IGVFFI6016DKST/), [IGVFFI9878YEIY](/sequence-files/IGVFFI9878YEIY/), [IGVFFI1038XBLN](/sequence-files/IGVFFI1038XBLN/), [IGVFFI2730LOVX](/sequence-files/IGVFFI2730LOVX/), [IGVFFI9898JDVW](/sequence-files/IGVFFI9898JDVW/), [IGVFFI8437WBVG](/sequence-files/IGVFFI8437WBVG/), [IGVFFI9671IODL](/sequence-files/IGVFFI9671IODL/), [IGVFFI3124JAPN](/sequence-files/IGVFFI3124JAPN/), [IGVFFI5621TFTF](/sequence-files/IGVFFI5621TFTF/), [IGVFFI7707JBIS](/sequence-files/IGVFFI7707JBIS/), [IGVFFI3267WADW](/sequence-files/IGVFFI3267WADW/), [IGVFFI3646PBYT](/sequence-files/IGVFFI3646PBYT/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS6991WMGS/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS6991WMGS](/measurement-sets/IGVFDS6991WMGS/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS6991WMGS/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS6991WMGS](/measurement-sets/IGVFDS6991WMGS/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS6991WMGS/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T21:41:43.280571+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO1997RFPJ/",
"accession": "IGVFDO1997RFPJ",
"aliases": [
"igvf:corces_donor_BANN1340"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5205IAEO/",
"accession": "IGVFDO5205IAEO",
"aliases": [
"igvf:corces_donor_BANN1632"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8155MCUV/",
"accession": "IGVFDO8155MCUV",
"aliases": [
"igvf:corces_donor_BANN0437"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5194SXHC/",
"accession": "IGVFDO5194SXHC",
"aliases": [
"igvf:corces_donor_BANN1747"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2848YHMH/",
"accession": "IGVFDO2848YHMH",
"aliases": [
"igvf:corces_donor_BANN2038"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7227BIXW/",
"accession": "IGVFDO7227BIXW",
"aliases": [
"igvf:corces_donor_BANN1614"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8344LUQZ/",
"accession": "IGVFDO8344LUQZ",
"aliases": [
"igvf:corces_donor_BANN0621"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7306YMGC/",
"accession": "IGVFDO7306YMGC",
"aliases": [
"igvf:corces_donor_BANN0517"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1278CNID/",
"accession": "IGVFDO1278CNID",
"aliases": [
"igvf:corces_donor_BANN1506"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8046LKFZ/",
"accession": "IGVFDO8046LKFZ",
"aliases": [
"igvf:corces_donor_BANN1242"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4053HEKW/",
"accession": "IGVFDO4053HEKW",
"aliases": [
"igvf:corces_donor_BANN1317"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5410JIJT/",
"accession": "IGVFDO5410JIJT",
"aliases": [
"igvf:corces_donor_BANN0919"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI2392NGTP/",
"accession": "IGVFFI2392NGTP",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L004_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:52:22.495797+00:00",
"file_format": "fastq",
"file_size": 361328837,
"href": "/sequence-files/IGVFFI2392NGTP/@@download/IGVFFI2392NGTP.fastq.gz",
"md5sum": "875206e689bb54735e7c15e0d9876b0f",
"s3_uri": "s3://igvf-files/2025/03/20/8081226f-4441-4fd3-9ed5-48b6596efad2/IGVFFI2392NGTP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L004_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5854EPXZ/",
"accession": "IGVFFI5854EPXZ",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L001_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:51:47.617787+00:00",
"file_format": "fastq",
"file_size": 2802716367,
"href": "/sequence-files/IGVFFI5854EPXZ/@@download/IGVFFI5854EPXZ.fastq.gz",
"md5sum": "8740a59e030fb39539b8efbfe49261c7",
"s3_uri": "s3://igvf-files/2025/03/20/089490a4-8c08-47a9-92c2-41b8c4f30638/IGVFFI5854EPXZ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L001_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2158NDLP/",
"accession": "IGVFFI2158NDLP",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L003_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:52:05.653588+00:00",
"file_format": "fastq",
"file_size": 360673209,
"href": "/sequence-files/IGVFFI2158NDLP/@@download/IGVFFI2158NDLP.fastq.gz",
"md5sum": "ed8cdff2d10769f8b417df9e44e9f76f",
"s3_uri": "s3://igvf-files/2025/03/20/e0b8a23a-db00-46ea-a80e-a41802f09095/IGVFFI2158NDLP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L003_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6016DKST/",
"accession": "IGVFFI6016DKST",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L002_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:52:01.255373+00:00",
"file_format": "fastq",
"file_size": 2886824540,
"href": "/sequence-files/IGVFFI6016DKST/@@download/IGVFFI6016DKST.fastq.gz",
"md5sum": "03dd25491712708756aef796d431557b",
"s3_uri": "s3://igvf-files/2025/03/20/e50dc36d-2d8a-40e7-a381-089cc07d4ffe/IGVFFI6016DKST.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L002_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9878YEIY/",
"accession": "IGVFFI9878YEIY",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L003_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:52:19.402848+00:00",
"file_format": "fastq",
"file_size": 2818592491,
"href": "/sequence-files/IGVFFI9878YEIY/@@download/IGVFFI9878YEIY.fastq.gz",
"md5sum": "b40eebfad1054415c7f2063d00914b54",
"s3_uri": "s3://igvf-files/2025/03/20/ffab5ba7-e84c-46bd-8d3f-1d914b93c59b/IGVFFI9878YEIY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L003_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1038XBLN/",
"accession": "IGVFFI1038XBLN",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L004_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:52:28.345952+00:00",
"file_format": "fastq",
"file_size": 1337376075,
"href": "/sequence-files/IGVFFI1038XBLN/@@download/IGVFFI1038XBLN.fastq.gz",
"md5sum": "f80274ea1b43e14179c6eba4e35b045d",
"s3_uri": "s3://igvf-files/2025/03/20/33d0a272-0559-46a3-a0de-3de976165fc2/IGVFFI1038XBLN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L004_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2730LOVX/",
"accession": "IGVFFI2730LOVX",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L004_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:52:31.915754+00:00",
"file_format": "fastq",
"file_size": 2856227285,
"href": "/sequence-files/IGVFFI2730LOVX/@@download/IGVFFI2730LOVX.fastq.gz",
"md5sum": "18db56a4461572871707a1c54bf42b38",
"s3_uri": "s3://igvf-files/2025/03/20/172712f8-f9d3-4897-83fd-cacfcb9ae3e5/IGVFFI2730LOVX.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L004_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9898JDVW/",
"accession": "IGVFFI9898JDVW",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L004_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:52:25.249131+00:00",
"file_format": "fastq",
"file_size": 463081141,
"href": "/sequence-files/IGVFFI9898JDVW/@@download/IGVFFI9898JDVW.fastq.gz",
"md5sum": "08c4a8f0c3d9d9661747f5baaea709fb",
"s3_uri": "s3://igvf-files/2025/03/20/5ca23d2a-2e83-4e85-b2ce-753808f2a2bb/IGVFFI9898JDVW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L004_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8437WBVG/",
"accession": "IGVFFI8437WBVG",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L003_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:52:14.938141+00:00",
"file_format": "fastq",
"file_size": 1323080654,
"href": "/sequence-files/IGVFFI8437WBVG/@@download/IGVFFI8437WBVG.fastq.gz",
"md5sum": "8785ad5d15e026f4c4610740bb3caef8",
"s3_uri": "s3://igvf-files/2025/03/20/bbb9d809-5630-4bca-af18-705c35c183d3/IGVFFI8437WBVG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L003_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9671IODL/",
"accession": "IGVFFI9671IODL",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L001_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:51:40.965723+00:00",
"file_format": "fastq",
"file_size": 453250247,
"href": "/sequence-files/IGVFFI9671IODL/@@download/IGVFFI9671IODL.fastq.gz",
"md5sum": "10d8640b3329c0c0b60bd9e4b126ea67",
"s3_uri": "s3://igvf-files/2025/03/20/ea03cf4d-43e2-4dcf-b351-21470b2feef1/IGVFFI9671IODL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L001_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3124JAPN/",
"accession": "IGVFFI3124JAPN",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L001_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:51:44.242177+00:00",
"file_format": "fastq",
"file_size": 1309369597,
"href": "/sequence-files/IGVFFI3124JAPN/@@download/IGVFFI3124JAPN.fastq.gz",
"md5sum": "cef47ea76b1e0c478306becf396635eb",
"s3_uri": "s3://igvf-files/2025/03/20/198d3b22-99ee-4693-9549-17b9907c6f27/IGVFFI3124JAPN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L001_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5621TFTF/",
"accession": "IGVFFI5621TFTF",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L002_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:51:54.672971+00:00",
"file_format": "fastq",
"file_size": 466818009,
"href": "/sequence-files/IGVFFI5621TFTF/@@download/IGVFFI5621TFTF.fastq.gz",
"md5sum": "37a4a75b9483498b3cad4086827c3d3e",
"s3_uri": "s3://igvf-files/2025/03/20/deebfead-eb86-4b78-bb80-577242a5b02e/IGVFFI5621TFTF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L002_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7707JBIS/",
"accession": "IGVFFI7707JBIS",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L002_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:51:57.461114+00:00",
"file_format": "fastq",
"file_size": 1350934326,
"href": "/sequence-files/IGVFFI7707JBIS/@@download/IGVFFI7707JBIS.fastq.gz",
"md5sum": "4a9f729e56de018836c51a6b2b25da34",
"s3_uri": "s3://igvf-files/2025/03/20/d930d73b-57e9-44e8-bc75-a7237d3bb485/IGVFFI7707JBIS.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L002_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3267WADW/",
"accession": "IGVFFI3267WADW",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L003_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:52:10.270796+00:00",
"file_format": "fastq",
"file_size": 457309821,
"href": "/sequence-files/IGVFFI3267WADW/@@download/IGVFFI3267WADW.fastq.gz",
"md5sum": "a1e85b494db1d23ac00f8db8c1198670",
"s3_uri": "s3://igvf-files/2025/03/20/157f3c17-cb9a-4f3c-a1c6-58c004d5d244/IGVFFI3267WADW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L003_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3646PBYT/",
"accession": "IGVFFI3646PBYT",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP008_G8_P058_L002_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T16:51:51.073438+00:00",
"file_format": "fastq",
"file_size": 372255223,
"href": "/sequence-files/IGVFFI3646PBYT/@@download/IGVFFI3646PBYT.fastq.gz",
"md5sum": "ad3468b22473c8ad0c75d93e5512b54f",
"s3_uri": "s3://igvf-files/2025/03/20/cbd3ec89-b624-48bc-9284-c2ed9702b74b/IGVFFI3646PBYT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP008_G8_L008_P058_S8_L002_I1_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI8751YQRY/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS8701BRPU/",
"accession": "IGVFDS8701BRPU",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM9455XPMQ/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM9455XPMQ",
"aliases": [
"igvf:corces_multiplexedSample_RP008_G8"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_2377/",
"status": "in progress",
"term_name": "multiple sclerosis"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
},
{
"@id": "/phenotype-terms/MONDO_0004975/",
"status": "released",
"term_name": "Alzheimer disease"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 69 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 79 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T16:51:40.965723+00:00",
"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "7ab58726-20ec-4d0f-b66b-66708e28bfeb"
}