{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS6932ECNS/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS6932ECNS",
"aliases": [
"igvf:corces_measurementSet_X042_G6_ATAC"
],
"assay_term": {
"@id": "/assay-terms/OBI_0002762/",
"assay_slims": [
"chromatin accessibility"
],
"status": "released",
"term_name": "single-nucleus ATAC-seq"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1193ADXF](/human-donors/IGVFDO1193ADXF/) has in progress subobject phenotypic feature [279a8cfa-df78-4f65-b467-208910686926](/phenotypic-features/279a8cfa-df78-4f65-b467-208910686926/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1193ADXF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1193ADXF](/human-donors/IGVFDO1193ADXF/) has in progress subobject phenotypic feature [93979346-c11f-4d0b-b07c-90f861ef699c](/phenotypic-features/93979346-c11f-4d0b-b07c-90f861ef699c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1193ADXF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1193ADXF](/human-donors/IGVFDO1193ADXF/) has in progress subobject phenotypic feature [e2d46162-d41b-46e0-ba19-eae086376019](/phenotypic-features/e2d46162-d41b-46e0-ba19-eae086376019/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1193ADXF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1193ADXF](/human-donors/IGVFDO1193ADXF/) has in progress subobject phenotypic feature [62bb3460-ad06-40c4-87b1-1a5452747e60](/phenotypic-features/62bb3460-ad06-40c4-87b1-1a5452747e60/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1193ADXF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1193ADXF](/human-donors/IGVFDO1193ADXF/) has in progress subobject phenotypic feature [d1f7d300-5078-4ec2-97cc-74a87fa5d19f](/phenotypic-features/d1f7d300-5078-4ec2-97cc-74a87fa5d19f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1193ADXF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1193ADXF](/human-donors/IGVFDO1193ADXF/) has in progress subobject phenotypic feature [ae58bc08-631a-47de-bba1-317adaf5e4a1](/phenotypic-features/ae58bc08-631a-47de-bba1-317adaf5e4a1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1193ADXF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0877AIRF](/human-donors/IGVFDO0877AIRF/) has in progress subobject phenotypic feature [9df15467-9b83-483e-b302-a439901190a9](/phenotypic-features/9df15467-9b83-483e-b302-a439901190a9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0877AIRF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0877AIRF](/human-donors/IGVFDO0877AIRF/) has in progress subobject phenotypic feature [12439d91-be0e-47bd-a650-7d4d0012dd77](/phenotypic-features/12439d91-be0e-47bd-a650-7d4d0012dd77/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0877AIRF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0877AIRF](/human-donors/IGVFDO0877AIRF/) has in progress subobject phenotypic feature [01acc26d-45b6-4c69-97f8-cc30bfc6cdd8](/phenotypic-features/01acc26d-45b6-4c69-97f8-cc30bfc6cdd8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0877AIRF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0877AIRF](/human-donors/IGVFDO0877AIRF/) has in progress subobject phenotypic feature [0aa42a38-0b44-4c44-b7af-09e1903ec9ca](/phenotypic-features/0aa42a38-0b44-4c44-b7af-09e1903ec9ca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0877AIRF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0877AIRF](/human-donors/IGVFDO0877AIRF/) has in progress subobject phenotypic feature [5713e607-49ee-4473-af3d-faa7eb766335](/phenotypic-features/5713e607-49ee-4473-af3d-faa7eb766335/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0877AIRF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [15a2db58-5d04-4278-9bcf-bbb6923e95b2](/phenotypic-features/15a2db58-5d04-4278-9bcf-bbb6923e95b2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [8873c4a9-e724-443a-a05e-06e9e0b589d5](/phenotypic-features/8873c4a9-e724-443a-a05e-06e9e0b589d5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [a0192d92-603a-484a-9f0f-36150134dec4](/phenotypic-features/a0192d92-603a-484a-9f0f-36150134dec4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [cc4f681e-74b9-4639-96f4-47f5c05c6ff2](/phenotypic-features/cc4f681e-74b9-4639-96f4-47f5c05c6ff2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [4d73651a-95b0-453f-bf9e-85a83965b18b](/phenotypic-features/4d73651a-95b0-453f-bf9e-85a83965b18b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0565OSFT](/human-donors/IGVFDO0565OSFT/) has in progress subobject phenotypic feature [e4a3f50a-af00-468e-a649-00d00f9509fa](/phenotypic-features/e4a3f50a-af00-468e-a649-00d00f9509fa/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0565OSFT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8670MHXE](/human-donors/IGVFDO8670MHXE/) has in progress subobject phenotypic feature [a0abf74d-a52a-440e-93a8-2efe26c75d7e](/phenotypic-features/a0abf74d-a52a-440e-93a8-2efe26c75d7e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8670MHXE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8670MHXE](/human-donors/IGVFDO8670MHXE/) has in progress subobject phenotypic feature [1cc41731-96a5-4b5b-8310-74a2a3d6a4c8](/phenotypic-features/1cc41731-96a5-4b5b-8310-74a2a3d6a4c8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8670MHXE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8670MHXE](/human-donors/IGVFDO8670MHXE/) has in progress subobject phenotypic feature [cb91524a-966f-4fc4-b3b8-5b1f5e9f7cd5](/phenotypic-features/cb91524a-966f-4fc4-b3b8-5b1f5e9f7cd5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8670MHXE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8670MHXE](/human-donors/IGVFDO8670MHXE/) has in progress subobject phenotypic feature [f32d9b8c-4e38-489a-8a87-0b307a6a8fc2](/phenotypic-features/f32d9b8c-4e38-489a-8a87-0b307a6a8fc2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8670MHXE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8670MHXE](/human-donors/IGVFDO8670MHXE/) has in progress subobject phenotypic feature [a06929df-06de-4952-af29-dd3beadf792f](/phenotypic-features/a06929df-06de-4952-af29-dd3beadf792f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8670MHXE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [30a806f6-8eeb-410a-a2db-f5b64f11b294](/phenotypic-features/30a806f6-8eeb-410a-a2db-f5b64f11b294/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [f57d3e32-48bd-4719-8d01-68046dd4734c](/phenotypic-features/f57d3e32-48bd-4719-8d01-68046dd4734c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [8e88e2ab-61fc-482b-a4b5-416755a847bc](/phenotypic-features/8e88e2ab-61fc-482b-a4b5-416755a847bc/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [22131022-5110-4ae2-91a6-98c3dcc35ee0](/phenotypic-features/22131022-5110-4ae2-91a6-98c3dcc35ee0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO3971UIZC](/human-donors/IGVFDO3971UIZC/) has in progress subobject phenotypic feature [e4feb5fc-ff23-4699-a4d2-620d59dcdd3e](/phenotypic-features/e4feb5fc-ff23-4699-a4d2-620d59dcdd3e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO3971UIZC/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0698ZMAQ](/human-donors/IGVFDO0698ZMAQ/) has in progress subobject phenotypic feature [04422160-4b28-4f05-81b5-5176e3d6f0fe](/phenotypic-features/04422160-4b28-4f05-81b5-5176e3d6f0fe/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0698ZMAQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0698ZMAQ](/human-donors/IGVFDO0698ZMAQ/) has in progress subobject phenotypic feature [2697c4cf-ae1b-4527-94d7-468cc278827c](/phenotypic-features/2697c4cf-ae1b-4527-94d7-468cc278827c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0698ZMAQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0698ZMAQ](/human-donors/IGVFDO0698ZMAQ/) has in progress subobject phenotypic feature [9c734026-0ef7-4063-b4fb-c186851d22b7](/phenotypic-features/9c734026-0ef7-4063-b4fb-c186851d22b7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0698ZMAQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0698ZMAQ](/human-donors/IGVFDO0698ZMAQ/) has in progress subobject phenotypic feature [c2348b93-2f59-4084-a1e7-62d405d2d45d](/phenotypic-features/c2348b93-2f59-4084-a1e7-62d405d2d45d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0698ZMAQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0698ZMAQ](/human-donors/IGVFDO0698ZMAQ/) has in progress subobject phenotypic feature [4e7ec6ce-25f7-4406-95f3-0908c9636077](/phenotypic-features/4e7ec6ce-25f7-4406-95f3-0908c9636077/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0698ZMAQ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7315DYIP](/human-donors/IGVFDO7315DYIP/) has in progress subobject phenotypic feature [a908a834-3967-47b5-a8e3-ad3f051d0fa8](/phenotypic-features/a908a834-3967-47b5-a8e3-ad3f051d0fa8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7315DYIP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7315DYIP](/human-donors/IGVFDO7315DYIP/) has in progress subobject phenotypic feature [eb53c56f-54bb-4364-b327-63a76034f93f](/phenotypic-features/eb53c56f-54bb-4364-b327-63a76034f93f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7315DYIP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7315DYIP](/human-donors/IGVFDO7315DYIP/) has in progress subobject phenotypic feature [a8584c0a-a8db-4f93-b5df-7c5bfb58f16c](/phenotypic-features/a8584c0a-a8db-4f93-b5df-7c5bfb58f16c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7315DYIP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7315DYIP](/human-donors/IGVFDO7315DYIP/) has in progress subobject phenotypic feature [b71738a8-2bcb-4128-aab9-a0f9f1ba9d62](/phenotypic-features/b71738a8-2bcb-4128-aab9-a0f9f1ba9d62/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7315DYIP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7315DYIP](/human-donors/IGVFDO7315DYIP/) has in progress subobject phenotypic feature [fc72aedb-99bf-4746-8ff8-d0f6988b741a](/phenotypic-features/fc72aedb-99bf-4746-8ff8-d0f6988b741a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7315DYIP/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [0165d0f4-b610-4164-9bc3-08dc74af02b3](/phenotypic-features/0165d0f4-b610-4164-9bc3-08dc74af02b3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [633cb08c-78bd-4268-b5d8-b893a02d26f8](/phenotypic-features/633cb08c-78bd-4268-b5d8-b893a02d26f8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [3a8f2048-d423-49dc-872f-a2d52489895c](/phenotypic-features/3a8f2048-d423-49dc-872f-a2d52489895c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [5d86271f-e200-458e-b626-d45775c1f778](/phenotypic-features/5d86271f-e200-458e-b626-d45775c1f778/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [f57b6265-94b7-4979-be4c-73ef23b5faba](/phenotypic-features/f57b6265-94b7-4979-be4c-73ef23b5faba/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [87d488ba-ef89-494c-8024-bee2b8535732](/phenotypic-features/87d488ba-ef89-494c-8024-bee2b8535732/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [46ac3c05-d084-4544-9dc8-dde826feacca](/phenotypic-features/46ac3c05-d084-4544-9dc8-dde826feacca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [1f96aec6-913b-49bc-a91c-fefe6ee0f2c8](/phenotypic-features/1f96aec6-913b-49bc-a91c-fefe6ee0f2c8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [d541e28f-08ad-4377-9c97-46a97fbcc210](/phenotypic-features/d541e28f-08ad-4377-9c97-46a97fbcc210/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [a7442a1b-b216-4558-b5ce-da87bc57ab97](/phenotypic-features/a7442a1b-b216-4558-b5ce-da87bc57ab97/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [b50b2000-1aa4-4de2-9522-a17abbcf0cdf](/phenotypic-features/b50b2000-1aa4-4de2-9522-a17abbcf0cdf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1797DNPW](/human-donors/IGVFDO1797DNPW/) has in progress subobject phenotypic feature [913486c6-1632-4162-988b-cd0caf90c409](/phenotypic-features/913486c6-1632-4162-988b-cd0caf90c409/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1797DNPW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4170HAEN](/human-donors/IGVFDO4170HAEN/) has in progress subobject phenotypic feature [2f322a5f-1431-487e-8ca5-7646bb63ac0b](/phenotypic-features/2f322a5f-1431-487e-8ca5-7646bb63ac0b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4170HAEN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4170HAEN](/human-donors/IGVFDO4170HAEN/) has in progress subobject phenotypic feature [73e45a6f-b113-48dc-b388-d74a2ffb2266](/phenotypic-features/73e45a6f-b113-48dc-b388-d74a2ffb2266/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4170HAEN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4170HAEN](/human-donors/IGVFDO4170HAEN/) has in progress subobject phenotypic feature [aa4cf396-805f-4d46-a35a-3f5592ddc346](/phenotypic-features/aa4cf396-805f-4d46-a35a-3f5592ddc346/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4170HAEN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4170HAEN](/human-donors/IGVFDO4170HAEN/) has in progress subobject phenotypic feature [18594154-e391-440a-8a78-4125804a3c04](/phenotypic-features/18594154-e391-440a-8a78-4125804a3c04/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4170HAEN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4170HAEN](/human-donors/IGVFDO4170HAEN/) has in progress subobject phenotypic feature [66fe5873-8396-48ca-996e-7fae115d714b](/phenotypic-features/66fe5873-8396-48ca-996e-7fae115d714b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4170HAEN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [eb56d44e-c3b9-4e22-aff7-d12c6ac5fa85](/phenotypic-features/eb56d44e-c3b9-4e22-aff7-d12c6ac5fa85/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [d0628ba8-dcc8-4c05-bf8e-08dbbb919b2f](/phenotypic-features/d0628ba8-dcc8-4c05-bf8e-08dbbb919b2f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [5df41812-ca61-438a-8942-0827a98215bf](/phenotypic-features/5df41812-ca61-438a-8942-0827a98215bf/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [1ef24011-d1f8-48ff-9e1f-555e57610cd6](/phenotypic-features/1ef24011-d1f8-48ff-9e1f-555e57610cd6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [46b3e3ac-e90e-4f3c-8941-5af5fceb9b99](/phenotypic-features/46b3e3ac-e90e-4f3c-8941-5af5fceb9b99/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8155MCUV](/human-donors/IGVFDO8155MCUV/) has in progress subobject phenotypic feature [ab0c4c39-15a5-415a-891b-05411b5bdfc6](/phenotypic-features/ab0c4c39-15a5-415a-891b-05411b5bdfc6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8155MCUV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [3295642e-7253-4693-922a-185ebc68252c](/phenotypic-features/3295642e-7253-4693-922a-185ebc68252c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [c827a4f6-432a-47ae-b18e-8c721e6d42e4](/phenotypic-features/c827a4f6-432a-47ae-b18e-8c721e6d42e4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [5cbf3905-6bd7-466b-b24d-ef7e96305b2e](/phenotypic-features/5cbf3905-6bd7-466b-b24d-ef7e96305b2e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [b9ba6294-fa01-45db-a342-02c340c406aa](/phenotypic-features/b9ba6294-fa01-45db-a342-02c340c406aa/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [18bd0e6a-eaaa-4747-9487-a3a7612a9df7](/phenotypic-features/18bd0e6a-eaaa-4747-9487-a3a7612a9df7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0909BNTN](/human-donors/IGVFDO0909BNTN/) has in progress subobject phenotypic feature [4da949c2-0863-4050-b35b-651746079c71](/phenotypic-features/4da949c2-0863-4050-b35b-651746079c71/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0909BNTN/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS6932ECNS](/measurement-sets/IGVFDS6932ECNS/) has sequence file(s): [IGVFFI7272MUUG](/sequence-files/IGVFFI7272MUUG/), [IGVFFI7336LBFA](/sequence-files/IGVFFI7336LBFA/), [IGVFFI0509AXQC](/sequence-files/IGVFFI0509AXQC/), [IGVFFI7797SCEU](/sequence-files/IGVFFI7797SCEU/), [IGVFFI6373AZBK](/sequence-files/IGVFFI6373AZBK/), [IGVFFI7628LVKZ](/sequence-files/IGVFFI7628LVKZ/), [IGVFFI0631UVEV](/sequence-files/IGVFFI0631UVEV/), [IGVFFI5867LZYZ](/sequence-files/IGVFFI5867LZYZ/), [IGVFFI3580VRNC](/sequence-files/IGVFFI3580VRNC/), [IGVFFI3579MERC](/sequence-files/IGVFFI3579MERC/), [IGVFFI7642HFUZ](/sequence-files/IGVFFI7642HFUZ/), [IGVFFI9762WNAC](/sequence-files/IGVFFI9762WNAC/), [IGVFFI2399EVTA](/sequence-files/IGVFFI2399EVTA/), [IGVFFI2554QRAP](/sequence-files/IGVFFI2554QRAP/), [IGVFFI2505QRHW](/sequence-files/IGVFFI2505QRHW/), [IGVFFI9749YQXL](/sequence-files/IGVFFI9749YQXL/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS6932ECNS/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS6932ECNS](/measurement-sets/IGVFDS6932ECNS/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS6932ECNS/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T19:46:23.385786+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO1193ADXF/",
"accession": "IGVFDO1193ADXF",
"aliases": [
"igvf:corces_donor_BANN1584"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0877AIRF/",
"accession": "IGVFDO0877AIRF",
"aliases": [
"igvf:corces_donor_BANN0417"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5205IAEO/",
"accession": "IGVFDO5205IAEO",
"aliases": [
"igvf:corces_donor_BANN1632"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8670MHXE/",
"accession": "IGVFDO8670MHXE",
"aliases": [
"igvf:corces_donor_BANN0874"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7315DYIP/",
"accession": "IGVFDO7315DYIP",
"aliases": [
"igvf:corces_donor_BANN1089"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8155MCUV/",
"accession": "IGVFDO8155MCUV",
"aliases": [
"igvf:corces_donor_BANN0437"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0909BNTN/",
"accession": "IGVFDO0909BNTN",
"aliases": [
"igvf:corces_donor_BANN1554"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4170HAEN/",
"accession": "IGVFDO4170HAEN",
"aliases": [
"igvf:corces_donor_BANN1864"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1797DNPW/",
"accession": "IGVFDO1797DNPW",
"aliases": [
"igvf:corces_donor_BANN1827"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0698ZMAQ/",
"accession": "IGVFDO0698ZMAQ",
"aliases": [
"igvf:corces_donor_BANN1569"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0565OSFT/",
"accession": "IGVFDO0565OSFT",
"aliases": [
"igvf:corces_donor_BANN1805"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3971UIZC/",
"accession": "IGVFDO3971UIZC",
"aliases": [
"igvf:corces_donor_BANN0217"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI7272MUUG/",
"accession": "IGVFFI7272MUUG",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L005_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:35:35.205851+00:00",
"file_format": "fastq",
"file_size": 1628955711,
"href": "/sequence-files/IGVFFI7272MUUG/@@download/IGVFFI7272MUUG.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/ecb6feb7-dac1-4900-9b8d-435489e82def/IGVFFI7272MUUG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L005_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7336LBFA/",
"accession": "IGVFFI7336LBFA",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L005_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:35:41.238824+00:00",
"file_format": "fastq",
"file_size": 1615915126,
"href": "/sequence-files/IGVFFI7336LBFA/@@download/IGVFFI7336LBFA.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/a0dc3d42-e64d-41bd-9b41-03138f177913/IGVFFI7336LBFA.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L005_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0509AXQC/",
"accession": "IGVFFI0509AXQC",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L006_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:35:53.101838+00:00",
"file_format": "fastq",
"file_size": 1602460657,
"href": "/sequence-files/IGVFFI0509AXQC/@@download/IGVFFI0509AXQC.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/2e63b05e-5221-4504-b3df-6236e075e356/IGVFFI0509AXQC.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L006_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7797SCEU/",
"accession": "IGVFFI7797SCEU",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L007_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:36:05.944428+00:00",
"file_format": "fastq",
"file_size": 1696082027,
"href": "/sequence-files/IGVFFI7797SCEU/@@download/IGVFFI7797SCEU.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/92ca4263-2791-4ff3-bbe5-7fff4788fda2/IGVFFI7797SCEU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L007_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6373AZBK/",
"accession": "IGVFFI6373AZBK",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L008_R3"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:36:18.838386+00:00",
"file_format": "fastq",
"file_size": 1652990301,
"href": "/sequence-files/IGVFFI6373AZBK/@@download/IGVFFI6373AZBK.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b3bc2555-e8c3-4d34-89c0-d8fdc0b0aabb/IGVFFI6373AZBK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L008_R3_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7628LVKZ/",
"accession": "IGVFFI7628LVKZ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L008_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:36:15.780520+00:00",
"file_format": "fastq",
"file_size": 910252544,
"href": "/sequence-files/IGVFFI7628LVKZ/@@download/IGVFFI7628LVKZ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/347e8cdb-967d-4b86-a2dd-d04672dc2b11/IGVFFI7628LVKZ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L008_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0631UVEV/",
"accession": "IGVFFI0631UVEV",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L006_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:35:47.387964+00:00",
"file_format": "fastq",
"file_size": 1615560325,
"href": "/sequence-files/IGVFFI0631UVEV/@@download/IGVFFI0631UVEV.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b77b2379-295f-4cac-8882-f675fce35bdd/IGVFFI0631UVEV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L006_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5867LZYZ/",
"accession": "IGVFFI5867LZYZ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:35:59.020746+00:00",
"file_format": "fastq",
"file_size": 1704096722,
"href": "/sequence-files/IGVFFI5867LZYZ/@@download/IGVFFI5867LZYZ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/a1ba1fc7-c532-4968-b9a6-f886671dd697/IGVFFI5867LZYZ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3580VRNC/",
"accession": "IGVFFI3580VRNC",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L005_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:35:31.633697+00:00",
"file_format": "fastq",
"file_size": 386901882,
"href": "/sequence-files/IGVFFI3580VRNC/@@download/IGVFFI3580VRNC.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/abb23a6c-be15-44dd-a06d-9bb37ae2bb99/IGVFFI3580VRNC.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L005_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3579MERC/",
"accession": "IGVFFI3579MERC",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:35:55.970573+00:00",
"file_format": "fastq",
"file_size": 400048592,
"href": "/sequence-files/IGVFFI3579MERC/@@download/IGVFFI3579MERC.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/52dc7afb-a472-4635-a79c-01e8de5ffa75/IGVFFI3579MERC.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L007_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7642HFUZ/",
"accession": "IGVFFI7642HFUZ",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:36:02.630677+00:00",
"file_format": "fastq",
"file_size": 933426111,
"href": "/sequence-files/IGVFFI7642HFUZ/@@download/IGVFFI7642HFUZ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/33b872f8-2f62-4a14-a833-37ca948c08ce/IGVFFI7642HFUZ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L007_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9762WNAC/",
"accession": "IGVFFI9762WNAC",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L005_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:35:38.272990+00:00",
"file_format": "fastq",
"file_size": 888951874,
"href": "/sequence-files/IGVFFI9762WNAC/@@download/IGVFFI9762WNAC.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/99835048-c5e4-49e3-ac54-c68a3c72b632/IGVFFI9762WNAC.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L005_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2399EVTA/",
"accession": "IGVFFI2399EVTA",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L006_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:35:45.242434+00:00",
"file_format": "fastq",
"file_size": 382896981,
"href": "/sequence-files/IGVFFI2399EVTA/@@download/IGVFFI2399EVTA.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/4e6f101e-9322-40be-aed6-1f0a8bb039d1/IGVFFI2399EVTA.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L006_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2554QRAP/",
"accession": "IGVFFI2554QRAP",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L006_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:35:50.115955+00:00",
"file_format": "fastq",
"file_size": 880842217,
"href": "/sequence-files/IGVFFI2554QRAP/@@download/IGVFFI2554QRAP.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/d20a1a5e-cae6-4c31-9416-00b88bb10b95/IGVFFI2554QRAP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L006_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2505QRHW/",
"accession": "IGVFFI2505QRHW",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L008_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:36:09.226098+00:00",
"file_format": "fastq",
"file_size": 389794083,
"href": "/sequence-files/IGVFFI2505QRHW/@@download/IGVFFI2505QRHW.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/00a3e019-6c6a-437c-97ec-4ee09862c987/IGVFFI2505QRHW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L008_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9749YQXL/",
"accession": "IGVFFI9749YQXL",
"aliases": [
"igvf:corces_sequenceFile_ATAC_X042_G6_P043_L008_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T03:36:12.328997+00:00",
"file_format": "fastq",
"file_size": 1659932824,
"href": "/sequence-files/IGVFFI9749YQXL/@@download/IGVFFI9749YQXL.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/e1684dc6-9bea-47f7-ad53-d0a435c7dbc3/IGVFFI9749YQXL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_ATAC_X042_G6_L006_P043_S24_L008_R1_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI7587TJLC/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS8894MIXR/",
"accession": "IGVFDS8894MIXR",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM1167MABH/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM1167MABH",
"aliases": [
"igvf:corces_multiplexedSample_X042_G6"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_2377/",
"status": "in progress",
"term_name": "multiple sclerosis"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
},
{
"@id": "/phenotype-terms/MONDO_0004975/",
"status": "released",
"term_name": "Alzheimer disease"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (female, 79 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T03:35:31.633697+00:00",
"summary": "single-nucleus ATAC-seq (10x multiome)",
"uuid": "22e3864f-f7e5-4cee-afe3-c9d960ad4ac3"
}