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IGVFDS6800SAZW

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 206)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 589
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

33 items
Read Names
fastq
reads
R2
8603
Read 2
22LMVNLT4
718 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8699
Read 2
22LMVNLT4
729 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8891
Barcode index
22LMVNLT4
437 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9083
Read 1
22LMVNLT4
741 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9179
Read 2
22LMVNLT4
670 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9179
Barcode index
22LMVNLT4
414 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8507
Read 2
22LMVNLT4
749 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8891
Read 1
22LMVNLT4
754 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4045
Read 2
22523KLT3
607 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8507
Read 1
22LMVNLT4
778 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 206)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 380
Jason Buenrostro, Broad