{
"@context": "/terms/",
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"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS6783TOHX",
"aliases": [
"ansuman-satpathy:snATAC-seq_igvf16_10x4"
],
"assay_term": {
"@id": "/assay-terms/OBI_0002762/",
"assay_slims": [
"chromatin accessibility"
],
"status": "released",
"term_name": "single-nucleus ATAC-seq"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "missing publication",
"detail": "Auxiliary set [IGVFDS8561MVXS](/auxiliary-sets/IGVFDS8561MVXS/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/auxiliary-sets/IGVFDS8561MVXS/"
},
{
"category": "mismatched status",
"detail": "Released auxiliary set [IGVFDS8561MVXS](/auxiliary-sets/IGVFDS8561MVXS/) has in progress subobject tabular file [IGVFFI2383CFVI](/tabular-files/IGVFFI2383CFVI/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/auxiliary-sets/IGVFDS8561MVXS/"
},
{
"category": "mismatched status",
"detail": "Released multiplexed sample [IGVFSM5245KVZO](/multiplexed-samples/IGVFSM5245KVZO/) has in progress subobject tabular file [IGVFFI2383CFVI](/tabular-files/IGVFFI2383CFVI/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/multiplexed-samples/IGVFSM5245KVZO/"
},
{
"category": "missing publication",
"detail": "Multiplexed sample [IGVFSM5245KVZO](/multiplexed-samples/IGVFSM5245KVZO/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/multiplexed-samples/IGVFSM5245KVZO/"
},
{
"category": "missing publication",
"detail": "Measurement set [IGVFDS6783TOHX](/measurement-sets/IGVFDS6783TOHX/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS6783TOHX/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS6783TOHX](/measurement-sets/IGVFDS6783TOHX/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS6783TOHX/"
}
]
},
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{
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"aliases": [
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],
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"status": "released"
}
],
"award": {
"@id": "/awards/HG012076/",
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"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
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"creation_timestamp": "2025-02-03T21:18:29.338222+00:00",
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],
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{
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],
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},
{
"@id": "/human-donors/IGVFDO4452ZQSF/",
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],
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},
{
"@id": "/human-donors/IGVFDO8129FWUV/",
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],
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4001VEAC/",
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],
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},
{
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},
{
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},
{
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},
{
"@id": "/human-donors/IGVFDO5656YCPC/",
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},
{
"@id": "/human-donors/IGVFDO1038DAII/",
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},
{
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},
{
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},
{
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},
{
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},
{
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},
{
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},
{
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{
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{
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{
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