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IGVFDS6781RGTM

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 604)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 1779
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
R2
8384
Read 2, Barcode index
22V3MJLT3
5.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8384
Read 1
22V3MJLT3
4.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8394
Read 1
22V3MJLT3
4.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8374
Read 1
22V3MJLT3
4.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8394
Read 2, Barcode index
22V3MJLT3
5.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8374
Read 2, Barcode index
22V3MJLT3
5.8 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 604)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • ali-mortazavi:773_CASTJ_10M
  • buenrostro-bernstein:Donor 2071
male
Mus musculus

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 843
Jason Buenrostro, Broad