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IGVFDS6703CAXM

released
GRU
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 199)
Protocols
Aliases
buenrostro-bernstein:scRNA Lib 379
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
R1
3976
Read 1
22523KLT3
907 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3976
Barcode index
22523KLT3
350 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3976
Read 2
22523KLT3
446 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
3940
Read 1
22523KLT3
844 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3940
Barcode index
22523KLT3
328 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3940
Read 2
22523KLT3
411 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 199)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:scATAC Lib 552
Jason Buenrostro, Broad