Home

IGVFDS6563MJUX

preview
This object is in preview status. Metadata is subject to change until this object is released.
File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (male, 73 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 90 or above years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples
Protocols
Aliases
igvf:corces_measurementSet_X029_G6_RNA
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R2
1
Read 2
HV7VHDSX5
2
12 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R1
1
Read 1
HV7VHDSX5
2
14 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I1
1
HV7VHDSX5
2
1.3 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
HV7VHDSX5
2
1.5 GB
Ryan Corces, Gladstone Institute UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 73 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 90 or above years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples

Donors

12 items
Aliases
  • igvf:corces_donor_BANN0218
male
Homo sapiens
  • igvf:corces_donor_BANN1063
male
Homo sapiens
  • igvf:corces_donor_BANN0526
male
Homo sapiens
  • igvf:corces_donor_BANN1719
female
Homo sapiens
  • igvf:corces_donor_BANN1864
male
Homo sapiens
  • igvf:corces_donor_BANN1833
male
Homo sapiens
  • igvf:corces_donor_BANN1747
male
Homo sapiens
  • igvf:corces_donor_BANN0912
male
Homo sapiens
  • igvf:corces_donor_BANN0124
male
Homo sapiens
  • igvf:corces_donor_BANN1546
female
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_X029_G6_ATAC
Ryan Corces, Gladstone Institute UCSF