IGVFDS6563MJUX

preview

This object is in preview status. Metadata is subject to change until this object is released.

File Set Type

experimental data

Summary

single-nucleus RNA sequencing assay (10x multiome)

Assay Term

single-nucleus RNA sequencing assay

Sample Summaries

multiplexed sample: Homo sapiens (male, 73 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 90 or above years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples

Protocols

https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn

Aliases

igvf:corces_measurementSet_X029_G6_RNA

Sequencing Results (Illumina)

4 items

Read Names

IGVFFI1805MDLI

fastq

reads

Illumina NovaSeq 6000

HV7VHDSX5

12 GB

Ryan Corces, Gladstone Institute UCSF

validated

IGVFFI3442ETLF

fastq

reads

Illumina NovaSeq 6000

HV7VHDSX5

14 GB

Ryan Corces, Gladstone Institute UCSF

validated

IGVFFI7900WVIV

fastq

reads

Illumina NovaSeq 6000

HV7VHDSX5

1.3 GB

Ryan Corces, Gladstone Institute UCSF

validated

IGVFFI9977MISL

fastq

reads

Illumina NovaSeq 6000

HV7VHDSX5

1.5 GB

Ryan Corces, Gladstone Institute UCSF

validated

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Associated Construct Library Sets

Summary

IGVFSM3632SNXG

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 73 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 90 or above years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples