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INDEXED
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MeasurementSet
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IGVFDS6481RUDF
IGVFDS6481RUDF
released
Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 9 days
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C37_day9
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0713CHLR
fastq
reads
R1
1
Illumina NovaSeq X
3
2.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI1623IEWH
fastq
reads
R2
2
Illumina NovaSeq X
7
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI2454IZEI
fastq
reads
R2
2
Illumina NovaSeq X
6
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI2748JBXN
fastq
reads
R1
1
Illumina NovaSeq X
2
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI3094VVCM
fastq
reads
R2
2
Illumina NovaSeq X
4
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI3626ILEB
fastq
reads
R1
1
Illumina NovaSeq X
5
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI3754KRWU
fastq
reads
R1
1
Illumina NovaSeq X
8
2.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI6139IOOJ
fastq
reads
R2
2
Illumina NovaSeq X
3
2.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI6158JXAE
fastq
reads
R1
1
Illumina NovaSeq X
1
2.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI6680TRBH
fastq
reads
R2
2
Illumina NovaSeq X
8
2.3 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM4191QVFQ
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 9 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO0351NYZH
chongyuan-luo:C37
unspecified
Homo sapiens