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IGVFDS6431QGJL

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File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (female, 25.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples
Protocols
Aliases
jimmie-ye:XX4-SC3_snRNA
Attribution
Jimmie Ye, UCSF

Sequencing Results (Illumina)

12 items
Read Names
fastq
reads
R2
430
Read 2
7.7 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
431
1.1 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
429
Read 2
7.8 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
429
Read 1
5.2 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
430
Read 1
5.1 GB
Jimmie Ye, UCSF
validated
fastq
reads
I2
430
1.1 GB
Jimmie Ye, UCSF
validated
fastq
reads
R2
431
Read 2
7.2 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
429
1.1 GB
Jimmie Ye, UCSF
validated
fastq
reads
I1
430
1.1 GB
Jimmie Ye, UCSF
validated
fastq
reads
R1
431
Read 1
4.8 GB
Jimmie Ye, UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 25.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Donors

20 items
Aliases
  • jimmie-ye:donor_27
male
Homo sapiens
  • jimmie-ye:donor_356
female
Homo sapiens
  • jimmie-ye:donor_295
female
Homo sapiens
  • jimmie-ye:donor_301
female
Homo sapiens
  • jimmie-ye:donor_235
male
Homo sapiens
  • jimmie-ye:donor_24
male
Homo sapiens
  • jimmie-ye:donor_26
male
Homo sapiens
  • jimmie-ye:donor_73
male
Homo sapiens
  • jimmie-ye:donor_25
female
Homo sapiens
  • jimmie-ye:donor_51
female
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • jimmie-ye:XX4-SC3_snATAC
Jimmie Ye, UCSF