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IGVFDS6369AVJI

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 180)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 446
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

33 items
Read Names
fastq
reads
I1
8954
Barcode index
22LMVNLT4
475 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9050
Read 1
22LMVNLT4
838 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4068
Barcode index
22523KLT3
542 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9146
Read 1
22LMVNLT4
798 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4032
Read 2
22523KLT3
621 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4068
Read 1
22523KLT3
1.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9050
Barcode index
22LMVNLT4
489 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8762
Read 2
22LMVNLT4
806 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8762
Barcode index
22LMVNLT4
487 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8474
Read 1
22LMVNLT4
872 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 180)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 365
Jason Buenrostro, Broad