{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS6332ATEF/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS6332ATEF",
"aliases": [
"igvf:corces_measurementSet_X050_G7_RNA"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [9987347f-6f4d-4d82-88c9-0c4c4317a278](/phenotypic-features/9987347f-6f4d-4d82-88c9-0c4c4317a278/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [67b114cf-7764-4391-8fd6-ac46ac9bc7a4](/phenotypic-features/67b114cf-7764-4391-8fd6-ac46ac9bc7a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [0fd0acf9-94ba-4952-9984-7d1e562d121a](/phenotypic-features/0fd0acf9-94ba-4952-9984-7d1e562d121a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [2215de1b-9e0d-47cd-a69d-7f4faf6b0976](/phenotypic-features/2215de1b-9e0d-47cd-a69d-7f4faf6b0976/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [be5d84fc-8dc2-496a-8ecf-440a2092a07c](/phenotypic-features/be5d84fc-8dc2-496a-8ecf-440a2092a07c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [fb128197-8fc4-4ae2-90ee-244353c5c115](/phenotypic-features/fb128197-8fc4-4ae2-90ee-244353c5c115/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [973e8365-f16f-4cd4-b8d8-3810cfb6de08](/phenotypic-features/973e8365-f16f-4cd4-b8d8-3810cfb6de08/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [3722891d-0d84-4ede-8520-3db83e7a6b16](/phenotypic-features/3722891d-0d84-4ede-8520-3db83e7a6b16/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [45dc979b-555f-4b01-8d0f-a743d2314876](/phenotypic-features/45dc979b-555f-4b01-8d0f-a743d2314876/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [633b00ad-b194-4a5e-996f-0e6e7d188a4b](/phenotypic-features/633b00ad-b194-4a5e-996f-0e6e7d188a4b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [c0ce9b04-e7ed-4b93-a2eb-beb1600b8a07](/phenotypic-features/c0ce9b04-e7ed-4b93-a2eb-beb1600b8a07/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [93b9663b-8d12-4847-b578-798d6d08a5d7](/phenotypic-features/93b9663b-8d12-4847-b578-798d6d08a5d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [b108288d-1ef0-4234-9b6b-10c5011f2d3e](/phenotypic-features/b108288d-1ef0-4234-9b6b-10c5011f2d3e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [74a7866d-ae30-4c3c-87c8-e6ee465cbb92](/phenotypic-features/74a7866d-ae30-4c3c-87c8-e6ee465cbb92/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [5cb28322-2d6b-409f-950e-f6b78c71b3c5](/phenotypic-features/5cb28322-2d6b-409f-950e-f6b78c71b3c5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [8790c6f7-88f2-4fb1-ac9c-edba4df8ee68](/phenotypic-features/8790c6f7-88f2-4fb1-ac9c-edba4df8ee68/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [e5d45886-2d5a-4f54-9595-ddecf9ee0dc3](/phenotypic-features/e5d45886-2d5a-4f54-9595-ddecf9ee0dc3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [a331f60c-ad57-4e67-abef-71ce7f5c533b](/phenotypic-features/a331f60c-ad57-4e67-abef-71ce7f5c533b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8a8a3203-c182-4206-8786-d22c604017ca](/phenotypic-features/8a8a3203-c182-4206-8786-d22c604017ca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [5aff39eb-64aa-4ab2-b6ac-9352e4e5974d](/phenotypic-features/5aff39eb-64aa-4ab2-b6ac-9352e4e5974d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8d33ce55-7875-4008-8ea0-117b359f3bde](/phenotypic-features/8d33ce55-7875-4008-8ea0-117b359f3bde/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [a0d65347-a21f-439b-bd5d-7232f0b1ee5e](/phenotypic-features/a0d65347-a21f-439b-bd5d-7232f0b1ee5e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [088a9bc3-3c47-43fb-a433-e98b083f05b0](/phenotypic-features/088a9bc3-3c47-43fb-a433-e98b083f05b0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c474daa4-7513-404e-94d5-875f37a7c343](/phenotypic-features/c474daa4-7513-404e-94d5-875f37a7c343/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c2483f59-ee42-47e9-855b-4121902f7e6e](/phenotypic-features/c2483f59-ee42-47e9-855b-4121902f7e6e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [bd6f3062-edeb-4a6b-8894-efd13d5f6d1a](/phenotypic-features/bd6f3062-edeb-4a6b-8894-efd13d5f6d1a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [688afed8-9edc-4232-aad4-2342093c1c09](/phenotypic-features/688afed8-9edc-4232-aad4-2342093c1c09/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [e714882d-9950-4b85-ac94-94d4b4819195](/phenotypic-features/e714882d-9950-4b85-ac94-94d4b4819195/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [46e3579d-2d7c-4261-9097-e79ce55659d7](/phenotypic-features/46e3579d-2d7c-4261-9097-e79ce55659d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [68f44c19-e788-4ddb-b0f1-648990236cdb](/phenotypic-features/68f44c19-e788-4ddb-b0f1-648990236cdb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [3b3c1422-094a-4628-8016-b68101826498](/phenotypic-features/3b3c1422-094a-4628-8016-b68101826498/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [90b0bf16-a18e-43cb-bb98-bf4669038218](/phenotypic-features/90b0bf16-a18e-43cb-bb98-bf4669038218/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [d04757f1-97fb-4880-b773-6e2de0dae7fb](/phenotypic-features/d04757f1-97fb-4880-b773-6e2de0dae7fb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [76d1545b-cd78-4f5a-a2ad-ee965a0866c1](/phenotypic-features/76d1545b-cd78-4f5a-a2ad-ee965a0866c1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [36fe54cd-7d3e-4900-b3c1-c60664f4a3d8](/phenotypic-features/36fe54cd-7d3e-4900-b3c1-c60664f4a3d8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [9bde93a0-8a45-4af9-a3d3-d227b912174e](/phenotypic-features/9bde93a0-8a45-4af9-a3d3-d227b912174e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [2695d331-284d-48de-b21c-48f1d4fbe99c](/phenotypic-features/2695d331-284d-48de-b21c-48f1d4fbe99c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [c5e31c41-b085-41c2-9f97-8b16d3d79237](/phenotypic-features/c5e31c41-b085-41c2-9f97-8b16d3d79237/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [29048a47-9d7d-4ad1-bc30-b97bd2c5e4d7](/phenotypic-features/29048a47-9d7d-4ad1-bc30-b97bd2c5e4d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [721cdbe5-854d-428a-85b6-a444e6fe94c3](/phenotypic-features/721cdbe5-854d-428a-85b6-a444e6fe94c3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [6a8d3945-6600-4f71-bc2d-3aa7cd079713](/phenotypic-features/6a8d3945-6600-4f71-bc2d-3aa7cd079713/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [c9ecdf8e-7c0f-473e-a8be-77797167794c](/phenotypic-features/c9ecdf8e-7c0f-473e-a8be-77797167794c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [95491ef2-b590-4c18-b81d-6c903ed626a4](/phenotypic-features/95491ef2-b590-4c18-b81d-6c903ed626a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [793031fc-a40d-4951-9abf-09dcf84149cb](/phenotypic-features/793031fc-a40d-4951-9abf-09dcf84149cb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [f869ce97-cce9-4af8-8c36-07e368584a17](/phenotypic-features/f869ce97-cce9-4af8-8c36-07e368584a17/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [d78f4b48-7bfb-40b4-a5a7-4e2207d7a43b](/phenotypic-features/d78f4b48-7bfb-40b4-a5a7-4e2207d7a43b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [fc0c92f4-96a4-4665-bf46-bf345a1cb081](/phenotypic-features/fc0c92f4-96a4-4665-bf46-bf345a1cb081/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [6ea3add1-256e-497d-b2ed-6440e1b9c61d](/phenotypic-features/6ea3add1-256e-497d-b2ed-6440e1b9c61d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [e6ce9dcf-358f-4bfa-88fe-80aa93093ef6](/phenotypic-features/e6ce9dcf-358f-4bfa-88fe-80aa93093ef6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [2d965f3b-4869-4a71-96f5-9b35c25cd94a](/phenotypic-features/2d965f3b-4869-4a71-96f5-9b35c25cd94a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [5d86271f-e200-458e-b626-d45775c1f778](/phenotypic-features/5d86271f-e200-458e-b626-d45775c1f778/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [633cb08c-78bd-4268-b5d8-b893a02d26f8](/phenotypic-features/633cb08c-78bd-4268-b5d8-b893a02d26f8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [3a8f2048-d423-49dc-872f-a2d52489895c](/phenotypic-features/3a8f2048-d423-49dc-872f-a2d52489895c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [f57b6265-94b7-4979-be4c-73ef23b5faba](/phenotypic-features/f57b6265-94b7-4979-be4c-73ef23b5faba/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [87d488ba-ef89-494c-8024-bee2b8535732](/phenotypic-features/87d488ba-ef89-494c-8024-bee2b8535732/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [0165d0f4-b610-4164-9bc3-08dc74af02b3](/phenotypic-features/0165d0f4-b610-4164-9bc3-08dc74af02b3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS6332ATEF](/measurement-sets/IGVFDS6332ATEF/) has sequence file(s): [IGVFFI3889EYSV](/sequence-files/IGVFFI3889EYSV/), [IGVFFI9755NQZL](/sequence-files/IGVFFI9755NQZL/), [IGVFFI4342ZLIZ](/sequence-files/IGVFFI4342ZLIZ/), [IGVFFI3252XCMZ](/sequence-files/IGVFFI3252XCMZ/), [IGVFFI8414WHUU](/sequence-files/IGVFFI8414WHUU/), [IGVFFI6453APLZ](/sequence-files/IGVFFI6453APLZ/), [IGVFFI9985LILB](/sequence-files/IGVFFI9985LILB/), [IGVFFI6960FYHY](/sequence-files/IGVFFI6960FYHY/), [IGVFFI7209HQCD](/sequence-files/IGVFFI7209HQCD/), [IGVFFI6122MXBR](/sequence-files/IGVFFI6122MXBR/), [IGVFFI4406XAKO](/sequence-files/IGVFFI4406XAKO/), [IGVFFI3991JHGF](/sequence-files/IGVFFI3991JHGF/), [IGVFFI6455WSZW](/sequence-files/IGVFFI6455WSZW/), [IGVFFI1659GGOY](/sequence-files/IGVFFI1659GGOY/), [IGVFFI6476KVQF](/sequence-files/IGVFFI6476KVQF/), [IGVFFI7096XMDB](/sequence-files/IGVFFI7096XMDB/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS6332ATEF/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS6332ATEF](/measurement-sets/IGVFDS6332ATEF/) is missing required `strand_specificity`. Gene expression based assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS6332ATEF/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS6332ATEF](/measurement-sets/IGVFDS6332ATEF/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS6332ATEF/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T21:38:41.683367+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO4825ZGIS/",
"accession": "IGVFDO4825ZGIS",
"aliases": [
"igvf:corces_donor_BANN2057"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0967LMSM/",
"accession": "IGVFDO0967LMSM",
"aliases": [
"igvf:corces_donor_BANN1973"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7227BIXW/",
"accession": "IGVFDO7227BIXW",
"aliases": [
"igvf:corces_donor_BANN1614"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7186XJLL/",
"accession": "IGVFDO7186XJLL",
"aliases": [
"igvf:corces_donor_BANN1639"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7387JZDV/",
"accession": "IGVFDO7387JZDV",
"aliases": [
"igvf:corces_donor_BANN1349"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6000JDZW/",
"accession": "IGVFDO6000JDZW",
"aliases": [
"igvf:corces_donor_BANN1858"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9236YUAT/",
"accession": "IGVFDO9236YUAT",
"aliases": [
"igvf:corces_donor_BANN0227"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6380POHE/",
"accession": "IGVFDO6380POHE",
"aliases": [
"igvf:corces_donor_BANN0124"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2559GIIZ/",
"accession": "IGVFDO2559GIIZ",
"aliases": [
"igvf:corces_donor_BANN2103"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5205IAEO/",
"accession": "IGVFDO5205IAEO",
"aliases": [
"igvf:corces_donor_BANN1632"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI3889EYSV/",
"accession": "IGVFFI3889EYSV",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L008_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:34.039463+00:00",
"file_format": "fastq",
"file_size": 408272801,
"href": "/sequence-files/IGVFFI3889EYSV/@@download/IGVFFI3889EYSV.fastq.gz",
"md5sum": "69e9414c705858c4d919288b76e3268b",
"s3_uri": "s3://igvf-files/2025/03/20/4e432f4a-0918-4b87-907b-da24ddbb968c/IGVFFI3889EYSV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L008_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9755NQZL/",
"accession": "IGVFFI9755NQZL",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L006_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:19.012563+00:00",
"file_format": "fastq",
"file_size": 3106925407,
"href": "/sequence-files/IGVFFI9755NQZL/@@download/IGVFFI9755NQZL.fastq.gz",
"md5sum": "c9371205f4c1860c62b0507231e43b46",
"s3_uri": "s3://igvf-files/2025/03/20/b90d91e5-f44e-48db-9298-75bca0403d05/IGVFFI9755NQZL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L006_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4342ZLIZ/",
"accession": "IGVFFI4342ZLIZ",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L005_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:08.609024+00:00",
"file_format": "fastq",
"file_size": 3160752349,
"href": "/sequence-files/IGVFFI4342ZLIZ/@@download/IGVFFI4342ZLIZ.fastq.gz",
"md5sum": "528c61fd0e984e0ee4f8250fe6ea311a",
"s3_uri": "s3://igvf-files/2025/03/20/d0d25a5c-6295-4a2c-9ab1-8ab20c89b01e/IGVFFI4342ZLIZ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L005_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3252XCMZ/",
"accession": "IGVFFI3252XCMZ",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L008_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:35.915272+00:00",
"file_format": "fastq",
"file_size": 1275250264,
"href": "/sequence-files/IGVFFI3252XCMZ/@@download/IGVFFI3252XCMZ.fastq.gz",
"md5sum": "1fcae64df04a8e7f1e1b5ce8862ab70e",
"s3_uri": "s3://igvf-files/2025/03/20/b312ac01-2e89-42be-9d14-d9da148a50e6/IGVFFI3252XCMZ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L008_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8414WHUU/",
"accession": "IGVFFI8414WHUU",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L006_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:16.747408+00:00",
"file_format": "fastq",
"file_size": 1452879311,
"href": "/sequence-files/IGVFFI8414WHUU/@@download/IGVFFI8414WHUU.fastq.gz",
"md5sum": "76ce8d330f268fe38ac84639311288fc",
"s3_uri": "s3://igvf-files/2025/03/20/6e8f641e-750c-4c6b-ac8f-60fd3407445b/IGVFFI8414WHUU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L006_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6453APLZ/",
"accession": "IGVFFI6453APLZ",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L006_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:14.929333+00:00",
"file_format": "fastq",
"file_size": 449672525,
"href": "/sequence-files/IGVFFI6453APLZ/@@download/IGVFFI6453APLZ.fastq.gz",
"md5sum": "cb84c3139252009812e179dd318672c9",
"s3_uri": "s3://igvf-files/2025/03/20/fe72ccde-3de7-40f0-8e4b-85085864fd57/IGVFFI6453APLZ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L006_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9985LILB/",
"accession": "IGVFFI9985LILB",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L006_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:10.939749+00:00",
"file_format": "fastq",
"file_size": 397761865,
"href": "/sequence-files/IGVFFI9985LILB/@@download/IGVFFI9985LILB.fastq.gz",
"md5sum": "1bf5d44002a715284070f4dbf52a4c0b",
"s3_uri": "s3://igvf-files/2025/03/20/bf148086-6456-421f-8fc1-f5ef8ba6ad62/IGVFFI9985LILB.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L006_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6960FYHY/",
"accession": "IGVFFI6960FYHY",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L008_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:31.837144+00:00",
"file_format": "fastq",
"file_size": 355978735,
"href": "/sequence-files/IGVFFI6960FYHY/@@download/IGVFFI6960FYHY.fastq.gz",
"md5sum": "0fa474477cf46b0d39cf4eea45885095",
"s3_uri": "s3://igvf-files/2025/03/20/bc3b1a04-7327-4456-b593-1d1a7907be89/IGVFFI6960FYHY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L008_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7209HQCD/",
"accession": "IGVFFI7209HQCD",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L005_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:03.547045+00:00",
"file_format": "fastq",
"file_size": 455433591,
"href": "/sequence-files/IGVFFI7209HQCD/@@download/IGVFFI7209HQCD.fastq.gz",
"md5sum": "be0b957544193340094f07379e8d2f51",
"s3_uri": "s3://igvf-files/2025/03/20/a0c9c73e-8347-4810-9d0b-5db3ba0500ae/IGVFFI7209HQCD.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L005_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6122MXBR/",
"accession": "IGVFFI6122MXBR",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L005_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:00.677120+00:00",
"file_format": "fastq",
"file_size": 403663685,
"href": "/sequence-files/IGVFFI6122MXBR/@@download/IGVFFI6122MXBR.fastq.gz",
"md5sum": "0c98cfc24bae83f6c2561fcd40a60a31",
"s3_uri": "s3://igvf-files/2025/03/20/e2858efa-e8be-43cc-8066-b12705a96bf2/IGVFFI6122MXBR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L005_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4406XAKO/",
"accession": "IGVFFI4406XAKO",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L005_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:06.098329+00:00",
"file_format": "fastq",
"file_size": 1474490870,
"href": "/sequence-files/IGVFFI4406XAKO/@@download/IGVFFI4406XAKO.fastq.gz",
"md5sum": "f67c91b379ac717796965b0359a0bd43",
"s3_uri": "s3://igvf-files/2025/03/20/dd8a9b44-7223-4d6e-a60a-79ce66e55767/IGVFFI4406XAKO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L005_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3991JHGF/",
"accession": "IGVFFI3991JHGF",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:27.053738+00:00",
"file_format": "fastq",
"file_size": 1370798896,
"href": "/sequence-files/IGVFFI3991JHGF/@@download/IGVFFI3991JHGF.fastq.gz",
"md5sum": "c69903d7de86c89fd78a0adfdb69b9a8",
"s3_uri": "s3://igvf-files/2025/03/20/5c022657-b5e1-4cd5-bf10-dc180c812a43/IGVFFI3991JHGF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6455WSZW/",
"accession": "IGVFFI6455WSZW",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L007_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:24.601942+00:00",
"file_format": "fastq",
"file_size": 432585917,
"href": "/sequence-files/IGVFFI6455WSZW/@@download/IGVFFI6455WSZW.fastq.gz",
"md5sum": "6209e67f35f66c6e55c6825882590ffb",
"s3_uri": "s3://igvf-files/2025/03/20/1a081146-6c0a-4c4a-8766-1160914352ff/IGVFFI6455WSZW.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L007_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1659GGOY/",
"accession": "IGVFFI1659GGOY",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:28.994787+00:00",
"file_format": "fastq",
"file_size": 2922048183,
"href": "/sequence-files/IGVFFI1659GGOY/@@download/IGVFFI1659GGOY.fastq.gz",
"md5sum": "7bdef137402150d6cacf7bfe60d1c8f8",
"s3_uri": "s3://igvf-files/2025/03/20/f29a3575-265b-4ae1-978e-452c450ae736/IGVFFI1659GGOY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L007_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6476KVQF/",
"accession": "IGVFFI6476KVQF",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L008_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:38.448823+00:00",
"file_format": "fastq",
"file_size": 2716917262,
"href": "/sequence-files/IGVFFI6476KVQF/@@download/IGVFFI6476KVQF.fastq.gz",
"md5sum": "2e30845f3b0d78c209e6b387f599fc85",
"s3_uri": "s3://igvf-files/2025/03/20/36a08ee3-cbb5-4182-b3f8-90efa30e676b/IGVFFI6476KVQF.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L008_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7096XMDB/",
"accession": "IGVFFI7096XMDB",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G7_P066_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:40:20.768944+00:00",
"file_format": "fastq",
"file_size": 379856867,
"href": "/sequence-files/IGVFFI7096XMDB/@@download/IGVFFI7096XMDB.fastq.gz",
"md5sum": "767050e2de52a997d13714febf972093",
"s3_uri": "s3://igvf-files/2025/03/20/1ce0d905-1300-4a20-a23a-148594d01992/IGVFFI7096XMDB.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G7_L007_P066_S37_L007_I1_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI8751YQRY/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS5426TEJZ/",
"accession": "IGVFDS5426TEJZ",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM5030LPJJ/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM5030LPJJ",
"aliases": [
"igvf:corces_multiplexedSample_X050_G7"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
},
{
"@id": "/phenotype-terms/MONDO_0004975/",
"status": "released",
"term_name": "Alzheimer disease"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; ... and 8 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T22:40:00.677120+00:00",
"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "b5ee7a34-06af-449b-b7b4-f5094c5f7f5e"
}