Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
MeasurementSet
/
IGVFDS6255OZNL
IGVFDS6255OZNL
released
No limitations
Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 3 days
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C37_day3
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0019WFUZ
fastq
reads
R1
1
Illumina NovaSeq X
6
3.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI0512VISP
fastq
reads
R1
1
Illumina NovaSeq X
5
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI0908DJJA
fastq
reads
R2
1
Illumina NovaSeq X
4
3.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI1183SVVO
fastq
reads
R2
1
Illumina NovaSeq X
5
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI1412SBMI
fastq
reads
R1
1
Illumina NovaSeq X
4
3.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI2183KQDB
fastq
reads
R2
1
Illumina NovaSeq X
3
3.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI2276SGNG
fastq
reads
R2
1
Illumina NovaSeq X
1
3.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI2660NMFU
fastq
reads
R1
1
Illumina NovaSeq X
1
3.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI2695NMON
fastq
reads
R1
1
Illumina NovaSeq X
8
3.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI3256FIXN
fastq
reads
R2
1
Illumina NovaSeq X
7
3.3 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM2615PEIB
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 3 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO0351NYZH
chongyuan-luo:C37
unspecified
Homo sapiens