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IGVFDS6108ZJGC

released
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Mus musculus B6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 574)
Protocols
Aliases
buenrostro-bernstein:scRNA Lib 808

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R1
8321
Read 1
22TMH5LT3
6.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8361
Read 1
22V3MJLT3
3.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8361
Read 2, Barcode index
22V3MJLT3
6.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8321
Read 2, Barcode index
22TMH5LT3
12 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus B6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 574)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • ali-mortazavi:771_B6J_10M
  • buenrostro-bernstein:Donor 2077
male
Mus musculus

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:scATAC Lib 1686
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad