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IGVFDS6090OHVV

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 181)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 452
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

21 items
Read Names
fastq
reads
R1
982
Read 1
22773CLT3
1.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
940
Read 1
22773CLT3
1.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1024
Read 1
22773CLT3
1.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
940
Read 2
22773CLT3
763 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4092
Read 1
22523KLT3
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4020
Read 1
22523KLT3
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1066
Read 1
22773CLT3
1.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4056
Barcode index
22523KLT3
497 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1066
Barcode index
22773CLT3
668 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1024
Barcode index
22773CLT3
682 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 181)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 437
Jason Buenrostro, Broad