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MeasurementSet
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IGVFDS6022TZAV
IGVFDS6022TZAV
released
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Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 12 days
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C38_day12
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0049ASTF
fastq
reads
R1
1
Illumina NovaSeq X
2
3.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI0099ZFLK
fastq
reads
R1
1
Illumina NovaSeq X
7
3.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI0556BQRL
fastq
reads
R2
1
Illumina NovaSeq X
8
3.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI0817AOTS
fastq
reads
R2
1
Illumina NovaSeq X
6
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI1075ZISR
fastq
reads
R1
1
Illumina NovaSeq X
3
3.1 GB
Chongyuan Luo, UCLA
validated
IGVFFI1738OKVC
fastq
reads
R2
1
Illumina NovaSeq X
5
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI2272RHXS
fastq
reads
R2
1
Illumina NovaSeq X
4
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI2791OSRK
fastq
reads
R2
1
Illumina NovaSeq X
2
3.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI4729UYMM
fastq
reads
R1
1
Illumina NovaSeq X
1
3.0 GB
Chongyuan Luo, UCLA
validated
IGVFFI4944LAEH
fastq
reads
R1
1
Illumina NovaSeq X
6
3.2 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM1838YXAS
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 12 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO2328XGNY
chongyuan-luo:C38
unspecified
Homo sapiens