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IGVFDS6011QOLR

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 206)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 593
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

33 items
Read Names
fastq
reads
R1
9183
Read 1
22LMVNLT4
650 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8991
Read 2
22LMVNLT4
629 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8703
Read 1
22LMVNLT4
696 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8799
Read 1
22LMVNLT4
688 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8799
Read 2
22LMVNLT4
663 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8799
Barcode index
22LMVNLT4
400 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4018
Read 1
22523KLT3
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9183
Barcode index
22LMVNLT4
381 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8511
Barcode index
22LMVNLT4
418 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4090
Read 2
22523KLT3
565 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 206)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 384
Jason Buenrostro, Broad