{
"@context": "/terms/",
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"MeasurementSet",
"FileSet",
"Item"
],
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"aliases": [
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],
"assay_term": {
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"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-cell RNA sequencing assay"
},
"audit": {
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Auxiliary set [IGVFDS8802CHOK](/auxiliary-sets/IGVFDS8802CHOK/) has sequence file(s): [IGVFFI4841RJZZ](/sequence-files/IGVFFI4841RJZZ/), [IGVFFI2701UBNX](/sequence-files/IGVFFI2701UBNX/), [IGVFFI8409DDJP](/sequence-files/IGVFFI8409DDJP/), [IGVFFI1968HTFI](/sequence-files/IGVFFI1968HTFI/), [IGVFFI0707UJHE](/sequence-files/IGVFFI0707UJHE/), [IGVFFI9810YLQA](/sequence-files/IGVFFI9810YLQA/), [IGVFFI9859PQKG](/sequence-files/IGVFFI9859PQKG/), [IGVFFI7711XHDM](/sequence-files/IGVFFI7711XHDM/), [IGVFFI7826EJET](/sequence-files/IGVFFI7826EJET/), [IGVFFI0712MNBI](/sequence-files/IGVFFI0712MNBI/), [IGVFFI0965VIXG](/sequence-files/IGVFFI0965VIXG/), [IGVFFI0274FVLO](/sequence-files/IGVFFI0274FVLO/), [IGVFFI8512JQZI](/sequence-files/IGVFFI8512JQZI/), [IGVFFI5719RJDH](/sequence-files/IGVFFI5719RJDH/), [IGVFFI6184LOTJ](/sequence-files/IGVFFI6184LOTJ/), [IGVFFI0022ARLY](/sequence-files/IGVFFI0022ARLY/), [IGVFFI4703EAAB](/sequence-files/IGVFFI4703EAAB/), [IGVFFI6733RRDC](/sequence-files/IGVFFI6733RRDC/), [IGVFFI0335OFSR](/sequence-files/IGVFFI0335OFSR/), [IGVFFI1495LZSW](/sequence-files/IGVFFI1495LZSW/), [IGVFFI4380WYZL](/sequence-files/IGVFFI4380WYZL/), [IGVFFI8250VJDT](/sequence-files/IGVFFI8250VJDT/), [IGVFFI7509YKFB](/sequence-files/IGVFFI7509YKFB/), [IGVFFI5757BBWU](/sequence-files/IGVFFI5757BBWU/), [IGVFFI9714SEEH](/sequence-files/IGVFFI9714SEEH/), [IGVFFI6639HISK](/sequence-files/IGVFFI6639HISK/), [IGVFFI6380RLVG](/sequence-files/IGVFFI6380RLVG/), [IGVFFI9893FNOZ](/sequence-files/IGVFFI9893FNOZ/), [IGVFFI1765BOZQ](/sequence-files/IGVFFI1765BOZQ/), [IGVFFI4177SILN](/sequence-files/IGVFFI4177SILN/), [IGVFFI7935BJNA](/sequence-files/IGVFFI7935BJNA/), [IGVFFI3197MWIE](/sequence-files/IGVFFI3197MWIE/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/auxiliary-sets/IGVFDS8802CHOK/"
},
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS5867EPVA](/measurement-sets/IGVFDS5867EPVA/) has sequence file(s): [IGVFFI7051LXQP](/sequence-files/IGVFFI7051LXQP/), [IGVFFI4842KHWR](/sequence-files/IGVFFI4842KHWR/), [IGVFFI8264NORL](/sequence-files/IGVFFI8264NORL/), [IGVFFI9427QGKM](/sequence-files/IGVFFI9427QGKM/), [IGVFFI5911IRSC](/sequence-files/IGVFFI5911IRSC/), [IGVFFI8250YZXI](/sequence-files/IGVFFI8250YZXI/), [IGVFFI5054SLPH](/sequence-files/IGVFFI5054SLPH/), [IGVFFI8402CXCB](/sequence-files/IGVFFI8402CXCB/), [IGVFFI9553KWLN](/sequence-files/IGVFFI9553KWLN/), [IGVFFI6046HGLQ](/sequence-files/IGVFFI6046HGLQ/), [IGVFFI3475FKDW](/sequence-files/IGVFFI3475FKDW/), [IGVFFI5293ERQT](/sequence-files/IGVFFI5293ERQT/), [IGVFFI3069IUKG](/sequence-files/IGVFFI3069IUKG/), [IGVFFI5739WHOD](/sequence-files/IGVFFI5739WHOD/), [IGVFFI7189BROY](/sequence-files/IGVFFI7189BROY/), [IGVFFI4869SUWE](/sequence-files/IGVFFI4869SUWE/), [IGVFFI1045UARS](/sequence-files/IGVFFI1045UARS/), [IGVFFI2380OHVF](/sequence-files/IGVFFI2380OHVF/), [IGVFFI3984UWRK](/sequence-files/IGVFFI3984UWRK/), [IGVFFI0785EVIF](/sequence-files/IGVFFI0785EVIF/), [IGVFFI9612KLAX](/sequence-files/IGVFFI9612KLAX/), [IGVFFI0829YKTW](/sequence-files/IGVFFI0829YKTW/), [IGVFFI2049ZZFE](/sequence-files/IGVFFI2049ZZFE/), [IGVFFI8093UBWK](/sequence-files/IGVFFI8093UBWK/), [IGVFFI9129HDQV](/sequence-files/IGVFFI9129HDQV/), [IGVFFI6217HHCQ](/sequence-files/IGVFFI6217HHCQ/), [IGVFFI1865PQVY](/sequence-files/IGVFFI1865PQVY/), [IGVFFI7161VXYB](/sequence-files/IGVFFI7161VXYB/), [IGVFFI8691TPYO](/sequence-files/IGVFFI8691TPYO/), [IGVFFI8163BHER](/sequence-files/IGVFFI8163BHER/), [IGVFFI3786VRMJ](/sequence-files/IGVFFI3786VRMJ/), [IGVFFI5866KFBU](/sequence-files/IGVFFI5866KFBU/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS5867EPVA/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS5867EPVA](/measurement-sets/IGVFDS5867EPVA/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS5867EPVA/"
}
]
},
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}
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"contact_pi": {
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"title": "Harinder Singh"
},
"title": "Linking genome variation to transcriptional network dynamics in human B cells"
},
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],
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],
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}
],
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