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IGVFDS5831VOEM

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 182)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 457
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

30 items
Read Names
fastq
reads
R2
8959
Read 2
22LMVNLT4
1.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4259
Barcode index
22523KLT3
2.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8575
Read 2
22LMVNLT4
1.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8671
Read 1
22LMVNLT4
1.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8575
Barcode index
22LMVNLT4
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8767
Barcode index
22LMVNLT4
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8959
Read 1
22LMVNLT4
1.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8767
Read 2
22LMVNLT4
1.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8863
Read 2
22LMVNLT4
1.9 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8671
Read 2
22LMVNLT4
1.9 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 182)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 370
Jason Buenrostro, Broad