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{
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"detail": "Measurement set [IGVFDS5819VBCX](/measurement-sets/IGVFDS5819VBCX/) has sequence file(s): [IGVFFI1940YIFL](/sequence-files/IGVFFI1940YIFL/), [IGVFFI3981RWIV](/sequence-files/IGVFFI3981RWIV/), [IGVFFI1922CUJD](/sequence-files/IGVFFI1922CUJD/), [IGVFFI2810VKPR](/sequence-files/IGVFFI2810VKPR/), [IGVFFI5550TXKR](/sequence-files/IGVFFI5550TXKR/), [IGVFFI2727TTUU](/sequence-files/IGVFFI2727TTUU/), [IGVFFI1836HWZA](/sequence-files/IGVFFI1836HWZA/), [IGVFFI8079AVCD](/sequence-files/IGVFFI8079AVCD/), [IGVFFI4338FMJV](/sequence-files/IGVFFI4338FMJV/), [IGVFFI8355JREH](/sequence-files/IGVFFI8355JREH/), [IGVFFI4149SFEO](/sequence-files/IGVFFI4149SFEO/), [IGVFFI1520RKOI](/sequence-files/IGVFFI1520RKOI/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS5819VBCX/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS5819VBCX](/measurement-sets/IGVFDS5819VBCX/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS5819VBCX/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS5819VBCX](/measurement-sets/IGVFDS5819VBCX/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS5819VBCX/"
}
]
},
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},
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},
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},
{
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{
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],
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"lab": {
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],
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{
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}
],
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],
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],
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{
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},
{
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],
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],
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{
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"Item"
],
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}
],
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"summary": "multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) substantia nigra tissue associated with Parkinson's disease; ... and 6 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
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"submitted_by": {
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},
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"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "61d89401-4b8d-4fc8-939e-e07d8b34d5fd"
}