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IGVFDS5810IJHF

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 181)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 450
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

21 items
Read Names
fastq
reads
I1
1064
Barcode index
22773CLT3
821 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
980
Read 1
22773CLT3
2.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4073
Read 2
22523KLT3
703 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4073
Read 1
22523KLT3
1.5 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1064
Read 2
22773CLT3
927 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4073
Barcode index
22523KLT3
612 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4001
Read 2
22523KLT3
697 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
938
Read 2
22773CLT3
934 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4037
Barcode index
22523KLT3
609 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
938
Read 1
22773CLT3
2.0 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 181)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 435
Jason Buenrostro, Broad