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INDEXED
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MeasurementSet
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IGVFDS5782BLYM
IGVFDS5782BLYM
released
Json view
File Set Type
experimental data
Summary
snMCT-seq
Assay Term
single-nucleus methylcytosine and transcriptome sequencing assay
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 12 days
Protocols
https://www.protocols.io/view/snmcat-v2-x54v9jby1g3e/v2
Aliases
chongyuan-luo:pgp_snmct_C29_day12
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
8 items
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0087VZWC
fastq
reads
R1
1
Illumina NovaSeq X
4
5.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI1775KKTK
fastq
reads
R2
2
Illumina NovaSeq X
1
5.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI1916INPL
fastq
reads
R2
2
Illumina NovaSeq X
2
5.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI2013TQMP
fastq
reads
R2
2
Illumina NovaSeq X
3
5.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI4077FXCR
fastq
reads
R2
2
Illumina NovaSeq X
4
5.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI6451RFDV
fastq
reads
R1
1
Illumina NovaSeq X
2
5.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI8282HSXG
fastq
reads
R1
1
Illumina NovaSeq X
1
5.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI8289WOAK
fastq
reads
R1
1
Illumina NovaSeq X
3
5.3 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM9153SKDZ
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 12 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO3754NCBP
chongyuan-luo:C29
unspecified
Homo sapiens