{
"@context": "/terms/",
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"MeasurementSet",
"FileSet",
"Item"
],
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"aliases": [
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],
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"@id": "/assay-terms/OBI_0002631/",
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],
"status": "released",
"term_name": "single-cell RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "missing publication",
"detail": "Measurement set [IGVFDS5591FUFR](/measurement-sets/IGVFDS5591FUFR/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS5591FUFR/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS5591FUFR](/measurement-sets/IGVFDS5591FUFR/) has in progress subobject tabular file [IGVFFI0400MBIM](/tabular-files/IGVFFI0400MBIM/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS5591FUFR/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS5591FUFR](/measurement-sets/IGVFDS5591FUFR/) has in progress subobject tabular file [IGVFFI1310BRDS](/tabular-files/IGVFFI1310BRDS/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS5591FUFR/"
},
{
"category": "missing publication",
"detail": "In vitro system [IGVFSM4044EEDT](/in-vitro-systems/IGVFSM4044EEDT/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM4044EEDT/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS5591FUFR](/measurement-sets/IGVFDS5591FUFR/) is missing required `strand_specificity`. Gene expression based assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS5591FUFR/"
}
]
},
"award": {
"@id": "/awards/HG011986/",
"component": "mapping",
"contact_pi": {
"@id": "/users/33c6eb70-e143-4f77-9661-4b3905737daa/",
"title": "Jason Buenrostro"
},
"title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
},
"control_for": [],
"controlled_access": true,
"creation_timestamp": "2024-08-20T15:00:07.342550+00:00",
"data_use_limitation_summaries": [
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],
"donors": [
{
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"accession": "IGVFDO3469EFJR",
"aliases": [
"buenrostro-bernstein:Donor 1741"
],
"sex": "unspecified",
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},
{
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],
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},
{
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],
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"status": "released",
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},
{
"@id": "/human-donors/IGVFDO9942ECYN/",
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},
{
"@id": "/human-donors/IGVFDO8886WODZ/",
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},
{
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],
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},
{
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},
{
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"sex": "unspecified",
"status": "released",
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},
{
"@id": "/human-donors/IGVFDO2318JQUM/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0948FTCE/",
"accession": "IGVFDO0948FTCE",
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3652LJLN/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3006ZNMC/",
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"status": "released",
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},
{
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},
{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8663MIYC/",
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2605TXDO/",
"accession": "IGVFDO2605TXDO",
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
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"status": "released",
"taxa": "Homo sapiens"
},
{
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7384GLJG/",
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9164SEDG/",
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3881ZKMA/",
"accession": "IGVFDO3881ZKMA",
"aliases": [
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9770WYQG/",
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9115TZAP/",
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"taxa": "Homo sapiens"
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{
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2588YUMG/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9079MLOT/",
"accession": "IGVFDO9079MLOT",
"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0279GJBF/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4923LWHA/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0508COBR/",
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},
{
"@id": "/human-donors/IGVFDO1255IJEH/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6704QEET/",
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0980QZSD/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3633ISAY/",
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5920NCRK/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4924NHKE/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1279HYUU/",
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},
{
"@id": "/human-donors/IGVFDO8042WODZ/",
"accession": "IGVFDO8042WODZ",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4974JBDF/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8979DYIF/",
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{
"@id": "/human-donors/IGVFDO5150ROJL/",
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{
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{
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},
{
"@id": "/human-donors/IGVFDO9835EEAJ/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4761JIBM/",
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"taxa": "Homo sapiens"
},
{
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},
{
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{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3082FYQJ/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1417AZJE/",
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4048DUKN/",
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},
{
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},
{
"@id": "/human-donors/IGVFDO3701XUXY/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9561MSAD/",
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8271RBMD/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9261YIGN/",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4449DKJZ/",
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],
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"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4092SMML/",
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2583SIHN/",
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0211CZWE/",
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8004EZUP/",
"accession": "IGVFDO8004EZUP",
"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9956LYMG/",
"accession": "IGVFDO9956LYMG",
"aliases": [
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"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8195QBTP/",
"accession": "IGVFDO8195QBTP",
"aliases": [
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"sex": "unspecified",
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5249VKYA/",
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5566VPJU/",
"accession": "IGVFDO5566VPJU",
"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0123YZDN/",
"accession": "IGVFDO0123YZDN",
"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9063CMXP/",
"accession": "IGVFDO9063CMXP",
"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2811ZFFP/",
"accession": "IGVFDO2811ZFFP",
"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3560WDAC/",
"accession": "IGVFDO3560WDAC",
"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO3115AJIV/",
"accession": "IGVFDO3115AJIV",
"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2540COFN/",
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"aliases": [
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],
"sex": "unspecified",
"status": "released",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7018SAYO/",
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{
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{
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"status": "released"
},
{
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"certificate_identifier": "IP113-18",
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{
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"certificate_identifier": "IP113-19",
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{
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],
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{
"@id": "/sample-terms/EFO_0004905/",
"@type": [
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"Item"
],
"status": "released",
"summary": "induced pluripotent stem cell",
"term_name": "induced pluripotent stem cell"
}
],
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"summary": "Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 206)",
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"status": "released",
"term_name": "hepatic oval stem cell"
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],
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"title": "Siddarth Wekhande"
},
"submitted_files_timestamp": "2024-08-20T15:18:44.051279+00:00",
"summary": "single-cell RNA sequencing assay (SHARE-seq)",
"uuid": "0f44a607-d197-4ae2-a794-bcd894326bdf"
}