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IGVFDS5588TNTQ

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 207)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 597
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
R1
4344
Read 1
H75F7DSX5
3.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8995
Read 2
22LMVNLT4
992 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9187
Read 1
22LMVNLT4
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8803
Barcode index
22LMVNLT4
627 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4344
Barcode index
H75F7DSX5
1.1 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3875
Read 2
22523KLT3
525 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9187
Read 2
22LMVNLT4
980 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3911
Barcode index
22523KLT3
452 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8803
Read 2
22LMVNLT4
1.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4380
Read 2
H75F7DSX5
1.3 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 207)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 240
Jason Buenrostro, Broad