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INDEXED
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MeasurementSet
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IGVFDS5562PVFA
IGVFDS5562PVFA
released
Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens (1 year) fibroblast cell
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C38_day0
Submitter Comment
This file set previously linked to the Sample /in-vitro-systems/IGVFSM6248OWYO/.
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0257AFQL
fastq
reads
R1
1
Illumina NovaSeq X
6
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI1339FFFP
fastq
reads
R2
2
Illumina NovaSeq X
3
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI2001JXCZ
fastq
reads
R2
2
Illumina NovaSeq X
1
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI2612OUGB
fastq
reads
R2
2
Illumina NovaSeq X
2
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI5295WLXB
fastq
reads
R1
1
Illumina NovaSeq X
2
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI5389VDPV
fastq
reads
R2
2
Illumina NovaSeq X
5
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI5507FPFX
fastq
reads
R2
2
Illumina NovaSeq X
8
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI5652UTVG
fastq
reads
R1
1
Illumina NovaSeq X
7
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI5967FRGV
fastq
reads
R2
2
Illumina NovaSeq X
4
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI6712NZWE
fastq
reads
R1
1
Illumina NovaSeq X
5
2.7 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM4462WZBJ
PrimaryCell
fibroblast
Homo sapiens (1 year) fibroblast cell
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO2328XGNY
chongyuan-luo:C38
unspecified
Homo sapiens