{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS5558GPUT/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS5558GPUT",
"aliases": [
"igvf:corces_measurementSet_X050_G4_RNA"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [46e3579d-2d7c-4261-9097-e79ce55659d7](/phenotypic-features/46e3579d-2d7c-4261-9097-e79ce55659d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [e714882d-9950-4b85-ac94-94d4b4819195](/phenotypic-features/e714882d-9950-4b85-ac94-94d4b4819195/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [68f44c19-e788-4ddb-b0f1-648990236cdb](/phenotypic-features/68f44c19-e788-4ddb-b0f1-648990236cdb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [90b0bf16-a18e-43cb-bb98-bf4669038218](/phenotypic-features/90b0bf16-a18e-43cb-bb98-bf4669038218/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO2559GIIZ](/human-donors/IGVFDO2559GIIZ/) has in progress subobject phenotypic feature [3b3c1422-094a-4628-8016-b68101826498](/phenotypic-features/3b3c1422-094a-4628-8016-b68101826498/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO2559GIIZ/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [688afed8-9edc-4232-aad4-2342093c1c09](/phenotypic-features/688afed8-9edc-4232-aad4-2342093c1c09/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c2483f59-ee42-47e9-855b-4121902f7e6e](/phenotypic-features/c2483f59-ee42-47e9-855b-4121902f7e6e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [088a9bc3-3c47-43fb-a433-e98b083f05b0](/phenotypic-features/088a9bc3-3c47-43fb-a433-e98b083f05b0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [bd6f3062-edeb-4a6b-8894-efd13d5f6d1a](/phenotypic-features/bd6f3062-edeb-4a6b-8894-efd13d5f6d1a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [a0d65347-a21f-439b-bd5d-7232f0b1ee5e](/phenotypic-features/a0d65347-a21f-439b-bd5d-7232f0b1ee5e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c474daa4-7513-404e-94d5-875f37a7c343](/phenotypic-features/c474daa4-7513-404e-94d5-875f37a7c343/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [0165d0f4-b610-4164-9bc3-08dc74af02b3](/phenotypic-features/0165d0f4-b610-4164-9bc3-08dc74af02b3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [3a8f2048-d423-49dc-872f-a2d52489895c](/phenotypic-features/3a8f2048-d423-49dc-872f-a2d52489895c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [633cb08c-78bd-4268-b5d8-b893a02d26f8](/phenotypic-features/633cb08c-78bd-4268-b5d8-b893a02d26f8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [5d86271f-e200-458e-b626-d45775c1f778](/phenotypic-features/5d86271f-e200-458e-b626-d45775c1f778/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [87d488ba-ef89-494c-8024-bee2b8535732](/phenotypic-features/87d488ba-ef89-494c-8024-bee2b8535732/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO5205IAEO](/human-donors/IGVFDO5205IAEO/) has in progress subobject phenotypic feature [f57b6265-94b7-4979-be4c-73ef23b5faba](/phenotypic-features/f57b6265-94b7-4979-be4c-73ef23b5faba/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO5205IAEO/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [45dc979b-555f-4b01-8d0f-a743d2314876](/phenotypic-features/45dc979b-555f-4b01-8d0f-a743d2314876/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [3722891d-0d84-4ede-8520-3db83e7a6b16](/phenotypic-features/3722891d-0d84-4ede-8520-3db83e7a6b16/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [973e8365-f16f-4cd4-b8d8-3810cfb6de08](/phenotypic-features/973e8365-f16f-4cd4-b8d8-3810cfb6de08/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [633b00ad-b194-4a5e-996f-0e6e7d188a4b](/phenotypic-features/633b00ad-b194-4a5e-996f-0e6e7d188a4b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9236YUAT](/human-donors/IGVFDO9236YUAT/) has in progress subobject phenotypic feature [c0ce9b04-e7ed-4b93-a2eb-beb1600b8a07](/phenotypic-features/c0ce9b04-e7ed-4b93-a2eb-beb1600b8a07/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9236YUAT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8d33ce55-7875-4008-8ea0-117b359f3bde](/phenotypic-features/8d33ce55-7875-4008-8ea0-117b359f3bde/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [e5d45886-2d5a-4f54-9595-ddecf9ee0dc3](/phenotypic-features/e5d45886-2d5a-4f54-9595-ddecf9ee0dc3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [5aff39eb-64aa-4ab2-b6ac-9352e4e5974d](/phenotypic-features/5aff39eb-64aa-4ab2-b6ac-9352e4e5974d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8a8a3203-c182-4206-8786-d22c604017ca](/phenotypic-features/8a8a3203-c182-4206-8786-d22c604017ca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [a331f60c-ad57-4e67-abef-71ce7f5c533b](/phenotypic-features/a331f60c-ad57-4e67-abef-71ce7f5c533b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [d78f4b48-7bfb-40b4-a5a7-4e2207d7a43b](/phenotypic-features/d78f4b48-7bfb-40b4-a5a7-4e2207d7a43b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [fc0c92f4-96a4-4665-bf46-bf345a1cb081](/phenotypic-features/fc0c92f4-96a4-4665-bf46-bf345a1cb081/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [f869ce97-cce9-4af8-8c36-07e368584a17](/phenotypic-features/f869ce97-cce9-4af8-8c36-07e368584a17/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [6ea3add1-256e-497d-b2ed-6440e1b9c61d](/phenotypic-features/6ea3add1-256e-497d-b2ed-6440e1b9c61d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [e6ce9dcf-358f-4bfa-88fe-80aa93093ef6](/phenotypic-features/e6ce9dcf-358f-4bfa-88fe-80aa93093ef6/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7186XJLL](/human-donors/IGVFDO7186XJLL/) has in progress subobject phenotypic feature [2d965f3b-4869-4a71-96f5-9b35c25cd94a](/phenotypic-features/2d965f3b-4869-4a71-96f5-9b35c25cd94a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7186XJLL/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [8790c6f7-88f2-4fb1-ac9c-edba4df8ee68](/phenotypic-features/8790c6f7-88f2-4fb1-ac9c-edba4df8ee68/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [93b9663b-8d12-4847-b578-798d6d08a5d7](/phenotypic-features/93b9663b-8d12-4847-b578-798d6d08a5d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [b108288d-1ef0-4234-9b6b-10c5011f2d3e](/phenotypic-features/b108288d-1ef0-4234-9b6b-10c5011f2d3e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [74a7866d-ae30-4c3c-87c8-e6ee465cbb92](/phenotypic-features/74a7866d-ae30-4c3c-87c8-e6ee465cbb92/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [5cb28322-2d6b-409f-950e-f6b78c71b3c5](/phenotypic-features/5cb28322-2d6b-409f-950e-f6b78c71b3c5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [36fe54cd-7d3e-4900-b3c1-c60664f4a3d8](/phenotypic-features/36fe54cd-7d3e-4900-b3c1-c60664f4a3d8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [9bde93a0-8a45-4af9-a3d3-d227b912174e](/phenotypic-features/9bde93a0-8a45-4af9-a3d3-d227b912174e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [2695d331-284d-48de-b21c-48f1d4fbe99c](/phenotypic-features/2695d331-284d-48de-b21c-48f1d4fbe99c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [d04757f1-97fb-4880-b773-6e2de0dae7fb](/phenotypic-features/d04757f1-97fb-4880-b773-6e2de0dae7fb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [76d1545b-cd78-4f5a-a2ad-ee965a0866c1](/phenotypic-features/76d1545b-cd78-4f5a-a2ad-ee965a0866c1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0967LMSM](/human-donors/IGVFDO0967LMSM/) has in progress subobject phenotypic feature [c5e31c41-b085-41c2-9f97-8b16d3d79237](/phenotypic-features/c5e31c41-b085-41c2-9f97-8b16d3d79237/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0967LMSM/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [29048a47-9d7d-4ad1-bc30-b97bd2c5e4d7](/phenotypic-features/29048a47-9d7d-4ad1-bc30-b97bd2c5e4d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [c9ecdf8e-7c0f-473e-a8be-77797167794c](/phenotypic-features/c9ecdf8e-7c0f-473e-a8be-77797167794c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [95491ef2-b590-4c18-b81d-6c903ed626a4](/phenotypic-features/95491ef2-b590-4c18-b81d-6c903ed626a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [793031fc-a40d-4951-9abf-09dcf84149cb](/phenotypic-features/793031fc-a40d-4951-9abf-09dcf84149cb/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [721cdbe5-854d-428a-85b6-a444e6fe94c3](/phenotypic-features/721cdbe5-854d-428a-85b6-a444e6fe94c3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7387JZDV](/human-donors/IGVFDO7387JZDV/) has in progress subobject phenotypic feature [6a8d3945-6600-4f71-bc2d-3aa7cd079713](/phenotypic-features/6a8d3945-6600-4f71-bc2d-3aa7cd079713/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7387JZDV/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [67b114cf-7764-4391-8fd6-ac46ac9bc7a4](/phenotypic-features/67b114cf-7764-4391-8fd6-ac46ac9bc7a4/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [fb128197-8fc4-4ae2-90ee-244353c5c115](/phenotypic-features/fb128197-8fc4-4ae2-90ee-244353c5c115/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [0fd0acf9-94ba-4952-9984-7d1e562d121a](/phenotypic-features/0fd0acf9-94ba-4952-9984-7d1e562d121a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [9987347f-6f4d-4d82-88c9-0c4c4317a278](/phenotypic-features/9987347f-6f4d-4d82-88c9-0c4c4317a278/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [2215de1b-9e0d-47cd-a69d-7f4faf6b0976](/phenotypic-features/2215de1b-9e0d-47cd-a69d-7f4faf6b0976/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO7227BIXW](/human-donors/IGVFDO7227BIXW/) has in progress subobject phenotypic feature [be5d84fc-8dc2-496a-8ecf-440a2092a07c](/phenotypic-features/be5d84fc-8dc2-496a-8ecf-440a2092a07c/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO7227BIXW/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS5558GPUT](/measurement-sets/IGVFDS5558GPUT/) has sequence file(s): [IGVFFI2039GZEO](/sequence-files/IGVFFI2039GZEO/), [IGVFFI5492SAOT](/sequence-files/IGVFFI5492SAOT/), [IGVFFI1643NDEI](/sequence-files/IGVFFI1643NDEI/), [IGVFFI0983LOFY](/sequence-files/IGVFFI0983LOFY/), [IGVFFI8696WNRO](/sequence-files/IGVFFI8696WNRO/), [IGVFFI6243XNQH](/sequence-files/IGVFFI6243XNQH/), [IGVFFI9811OVXQ](/sequence-files/IGVFFI9811OVXQ/), [IGVFFI7358KCGL](/sequence-files/IGVFFI7358KCGL/), [IGVFFI8196NXFG](/sequence-files/IGVFFI8196NXFG/), [IGVFFI3644ZZUK](/sequence-files/IGVFFI3644ZZUK/), [IGVFFI2098YMAL](/sequence-files/IGVFFI2098YMAL/), [IGVFFI6341TLTR](/sequence-files/IGVFFI6341TLTR/), [IGVFFI9595FUKE](/sequence-files/IGVFFI9595FUKE/), [IGVFFI6244HQTT](/sequence-files/IGVFFI6244HQTT/), [IGVFFI7314CVEH](/sequence-files/IGVFFI7314CVEH/), [IGVFFI9202UQJO](/sequence-files/IGVFFI9202UQJO/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS5558GPUT/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS5558GPUT](/measurement-sets/IGVFDS5558GPUT/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS5558GPUT/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS5558GPUT](/measurement-sets/IGVFDS5558GPUT/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS5558GPUT/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T21:38:38.182874+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO6000JDZW/",
"accession": "IGVFDO6000JDZW",
"aliases": [
"igvf:corces_donor_BANN1858"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7186XJLL/",
"accession": "IGVFDO7186XJLL",
"aliases": [
"igvf:corces_donor_BANN1639"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO2559GIIZ/",
"accession": "IGVFDO2559GIIZ",
"aliases": [
"igvf:corces_donor_BANN2103"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6380POHE/",
"accession": "IGVFDO6380POHE",
"aliases": [
"igvf:corces_donor_BANN0124"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0967LMSM/",
"accession": "IGVFDO0967LMSM",
"aliases": [
"igvf:corces_donor_BANN1973"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9236YUAT/",
"accession": "IGVFDO9236YUAT",
"aliases": [
"igvf:corces_donor_BANN0227"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7387JZDV/",
"accession": "IGVFDO7387JZDV",
"aliases": [
"igvf:corces_donor_BANN1349"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4825ZGIS/",
"accession": "IGVFDO4825ZGIS",
"aliases": [
"igvf:corces_donor_BANN2057"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5205IAEO/",
"accession": "IGVFDO5205IAEO",
"aliases": [
"igvf:corces_donor_BANN1632"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO7227BIXW/",
"accession": "IGVFDO7227BIXW",
"aliases": [
"igvf:corces_donor_BANN1614"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI2039GZEO/",
"accession": "IGVFFI2039GZEO",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L006_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:14.563560+00:00",
"file_format": "fastq",
"file_size": 417126492,
"href": "/sequence-files/IGVFFI2039GZEO/@@download/IGVFFI2039GZEO.fastq.gz",
"md5sum": "e39325eef1e3deffdd05679b6f53472f",
"s3_uri": "s3://igvf-files/2025/03/20/81531ab0-840c-4c45-b3a2-476979ee40d5/IGVFFI2039GZEO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L006_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5492SAOT/",
"accession": "IGVFFI5492SAOT",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L006_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:19.089796+00:00",
"file_format": "fastq",
"file_size": 1248689166,
"href": "/sequence-files/IGVFFI5492SAOT/@@download/IGVFFI5492SAOT.fastq.gz",
"md5sum": "dffa6b30b0e44ccc92fac20574ff89d3",
"s3_uri": "s3://igvf-files/2025/03/20/9bbe08a9-a8c2-4f0c-b3f7-17863b179d63/IGVFFI5492SAOT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L006_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1643NDEI/",
"accession": "IGVFFI1643NDEI",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L008_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:33.658857+00:00",
"file_format": "fastq",
"file_size": 401068090,
"href": "/sequence-files/IGVFFI1643NDEI/@@download/IGVFFI1643NDEI.fastq.gz",
"md5sum": "0e93c1b6feecacd039f777c36067f515",
"s3_uri": "s3://igvf-files/2025/03/20/a45a67ee-61d1-4192-803f-08729bef410e/IGVFFI1643NDEI.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L008_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0983LOFY/",
"accession": "IGVFFI0983LOFY",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L005_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:09.917035+00:00",
"file_format": "fastq",
"file_size": 1260535704,
"href": "/sequence-files/IGVFFI0983LOFY/@@download/IGVFFI0983LOFY.fastq.gz",
"md5sum": "e8eb262b3f8262ff447fa6cd78159fc0",
"s3_uri": "s3://igvf-files/2025/03/20/91a50840-437d-4917-bc50-b7fec428c822/IGVFFI0983LOFY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L005_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8696WNRO/",
"accession": "IGVFFI8696WNRO",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L005_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:12.097877+00:00",
"file_format": "fastq",
"file_size": 2708624667,
"href": "/sequence-files/IGVFFI8696WNRO/@@download/IGVFFI8696WNRO.fastq.gz",
"md5sum": "b2a5061f9f80d014c180c21c808e17c3",
"s3_uri": "s3://igvf-files/2025/03/20/793bede7-3b4d-4f58-a6fe-69b7c58068fc/IGVFFI8696WNRO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L005_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6243XNQH/",
"accession": "IGVFFI6243XNQH",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L007_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:24.245420+00:00",
"file_format": "fastq",
"file_size": 411295990,
"href": "/sequence-files/IGVFFI6243XNQH/@@download/IGVFFI6243XNQH.fastq.gz",
"md5sum": "6a2d143017cb4607fa48433977349f38",
"s3_uri": "s3://igvf-files/2025/03/20/cae2dbd1-0225-48ec-a9b2-04814935b274/IGVFFI6243XNQH.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L007_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9811OVXQ/",
"accession": "IGVFFI9811OVXQ",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L006_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:17.057406+00:00",
"file_format": "fastq",
"file_size": 358548549,
"href": "/sequence-files/IGVFFI9811OVXQ/@@download/IGVFFI9811OVXQ.fastq.gz",
"md5sum": "c156ffe9b2ca5425aacf94478c8d3bf8",
"s3_uri": "s3://igvf-files/2025/03/20/2ce5b08c-0457-46e9-ac49-5d7b21453a84/IGVFFI9811OVXQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L006_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7358KCGL/",
"accession": "IGVFFI7358KCGL",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L006_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:20.752191+00:00",
"file_format": "fastq",
"file_size": 2675550610,
"href": "/sequence-files/IGVFFI7358KCGL/@@download/IGVFFI7358KCGL.fastq.gz",
"md5sum": "586c17e34c08771ac0fd670c1fc06c52",
"s3_uri": "s3://igvf-files/2025/03/20/2f279c35-9c9f-488b-bf0c-56eb6ba03871/IGVFFI7358KCGL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L006_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8196NXFG/",
"accession": "IGVFFI8196NXFG",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L008_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:38.653506+00:00",
"file_format": "fastq",
"file_size": 1181843718,
"href": "/sequence-files/IGVFFI8196NXFG/@@download/IGVFFI8196NXFG.fastq.gz",
"md5sum": "e9fdcc40d9226439057b23db5520f10f",
"s3_uri": "s3://igvf-files/2025/03/20/a8982e2b-3d8a-4022-a70c-edd6d52b73bb/IGVFFI8196NXFG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L008_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3644ZZUK/",
"accession": "IGVFFI3644ZZUK",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L005_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:03.060559+00:00",
"file_format": "fastq",
"file_size": 420462435,
"href": "/sequence-files/IGVFFI3644ZZUK/@@download/IGVFFI3644ZZUK.fastq.gz",
"md5sum": "09e5e1970e92bee04742e18fec2721f0",
"s3_uri": "s3://igvf-files/2025/03/20/7f430b76-9fe8-4f7c-baff-17bf6d48f62b/IGVFFI3644ZZUK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L005_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2098YMAL/",
"accession": "IGVFFI2098YMAL",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L008_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:40.943489+00:00",
"file_format": "fastq",
"file_size": 2523051996,
"href": "/sequence-files/IGVFFI2098YMAL/@@download/IGVFFI2098YMAL.fastq.gz",
"md5sum": "1fb43c61e5369320396dffa068cd9ffe",
"s3_uri": "s3://igvf-files/2025/03/20/3dd08ecc-4123-4c5d-8864-dbb4f0fcc0c3/IGVFFI2098YMAL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L008_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6341TLTR/",
"accession": "IGVFFI6341TLTR",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L007_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:26.936153+00:00",
"file_format": "fastq",
"file_size": 356277385,
"href": "/sequence-files/IGVFFI6341TLTR/@@download/IGVFFI6341TLTR.fastq.gz",
"md5sum": "8c01a754318c0a8166ba91f26e328c79",
"s3_uri": "s3://igvf-files/2025/03/20/c8d86099-1ef4-4461-a3b0-af7b88ef59b4/IGVFFI6341TLTR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L007_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9595FUKE/",
"accession": "IGVFFI9595FUKE",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L007_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:28.999937+00:00",
"file_format": "fastq",
"file_size": 1219455576,
"href": "/sequence-files/IGVFFI9595FUKE/@@download/IGVFFI9595FUKE.fastq.gz",
"md5sum": "672ad0f5d110bf1a88ae35ece64a916b",
"s3_uri": "s3://igvf-files/2025/03/20/7cba5fdb-9387-4977-af9d-cc7e687e87dc/IGVFFI9595FUKE.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L007_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6244HQTT/",
"accession": "IGVFFI6244HQTT",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L008_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:35.566777+00:00",
"file_format": "fastq",
"file_size": 346521465,
"href": "/sequence-files/IGVFFI6244HQTT/@@download/IGVFFI6244HQTT.fastq.gz",
"md5sum": "fb4452225c64441c572d1152ec3bb3b9",
"s3_uri": "s3://igvf-files/2025/03/20/bcea37b4-505b-4e3e-b9ea-2413fb3fbfeb/IGVFFI6244HQTT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L008_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7314CVEH/",
"accession": "IGVFFI7314CVEH",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L005_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:06.413892+00:00",
"file_format": "fastq",
"file_size": 363750157,
"href": "/sequence-files/IGVFFI7314CVEH/@@download/IGVFFI7314CVEH.fastq.gz",
"md5sum": "43b2b5ec05172b763bbc2d544ec07050",
"s3_uri": "s3://igvf-files/2025/03/20/38bff45b-09a7-464e-9a6d-d086dae17b23/IGVFFI7314CVEH.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L005_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9202UQJO/",
"accession": "IGVFFI9202UQJO",
"aliases": [
"igvf:corces_sequenceFile_RNA_X050_G4_P066_L007_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T22:38:31.042648+00:00",
"file_format": "fastq",
"file_size": 2605621252,
"href": "/sequence-files/IGVFFI9202UQJO/@@download/IGVFFI9202UQJO.fastq.gz",
"md5sum": "047ef422ae385b97e4cbf895da3a7785",
"s3_uri": "s3://igvf-files/2025/03/20/2a7b5ac4-9006-4ac4-9e2d-e8a5f4fefd90/IGVFFI9202UQJO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_X050_G4_L004_P066_S34_L007_R2_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI8751YQRY/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS1897GFNY/",
"accession": "IGVFDS1897GFNY",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM7568QAEB/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM7568QAEB",
"aliases": [
"igvf:corces_multiplexedSample_X050_G4"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
},
{
"@id": "/phenotype-terms/MONDO_0004975/",
"status": "released",
"term_name": "Alzheimer disease"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 80 years) posterior cingulate gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; ... and 8 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T22:38:03.060559+00:00",
"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "244b5843-2f3b-41d7-b830-1d0a0053b443"
}