{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS5556SDQP/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS5556SDQP",
"aliases": [
"ali-mortazavi:011_67M_illumina"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000646](/sample-terms/NTR_0000646/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000646/"
},
{
"category": "missing publication",
"detail": "Measurement set [IGVFDS5556SDQP](/measurement-sets/IGVFDS5556SDQP/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS5556SDQP/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS5556SDQP](/measurement-sets/IGVFDS5556SDQP/) has in progress subobject tabular file [IGVFFI1138MCVX](/tabular-files/IGVFFI1138MCVX/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS5556SDQP/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS5556SDQP](/measurement-sets/IGVFDS5556SDQP/) has in progress subobject tabular file [IGVFFI2591OFQO](/tabular-files/IGVFFI2591OFQO/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS5556SDQP/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000750](/sample-terms/NTR_0000750/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000750/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000647](/sample-terms/NTR_0000647/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000647/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000751](/sample-terms/NTR_0000751/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000751/"
},
{
"category": "mismatched status",
"detail": "Released multiplexed sample [IGVFSM5782PILC](/multiplexed-samples/IGVFSM5782PILC/) has in progress subobject tabular file [IGVFFI5536TVIR](/tabular-files/IGVFFI5536TVIR/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/multiplexed-samples/IGVFSM5782PILC/"
},
{
"category": "missing publication",
"detail": "Multiplexed sample [IGVFSM5782PILC](/multiplexed-samples/IGVFSM5782PILC/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/multiplexed-samples/IGVFSM5782PILC/"
}
]
},
"award": {
"@id": "/awards/HG012077/",
"component": "mapping",
"contact_pi": {
"@id": "/users/2c33e192-e815-4384-a220-72a0992cbe24/",
"title": "Ali Mortazavi"
},
"title": "Center for Mouse Genomic Variation at Single Cell Resolution"
},
"control_for": [],
"creation_timestamp": "2023-10-14T20:40:51.243719+00:00",
"data_use_limitation_summaries": [
"no certificate"
],
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{
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"aliases": [
"ali-mortazavi:050_NZOJ_10F"
],
"sex": "female",
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},
{
"@id": "/rodent-donors/IGVFDO0430HQIU/",
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"ali-mortazavi:041_129S1J_10M"
],
"sex": "male",
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},
{
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],
"sex": "male",
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},
{
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],
"sex": "male",
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},
{
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],
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},
{
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],
"sex": "female",
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},
{
"@id": "/rodent-donors/IGVFDO5810HOHC/",
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],
"sex": "female",
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},
{
"@id": "/rodent-donors/IGVFDO5502NJPS/",
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],
"sex": "female",
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},
{
"@id": "/rodent-donors/IGVFDO0696DMIA/",
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],
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},
{
"@id": "/rodent-donors/IGVFDO8958JQIY/",
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],
"sex": "male",
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},
{
"@id": "/rodent-donors/IGVFDO5523UFUN/",
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],
"sex": "female",
"status": "released",
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},
{
"@id": "/rodent-donors/IGVFDO3207TERA/",
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],
"sex": "female",
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"strain_background": "CAST/EiJ (CAST)",
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},
{
"@id": "/rodent-donors/IGVFDO7062NBTQ/",
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],
"sex": "male",
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},
{
"@id": "/rodent-donors/IGVFDO8698PVAJ/",
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],
"sex": "female",
"status": "released",
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},
{
"@id": "/rodent-donors/IGVFDO3603MEIO/",
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],
"sex": "female",
"status": "released",
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},
{
"@id": "/rodent-donors/IGVFDO6219LVKW/",
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],
"sex": "female",
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},
{
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},
{
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],
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},
{
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},
{
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],
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},
{
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],
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},
{
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],
"sex": "male",
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},
{
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],
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},
{
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],
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},
{
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],
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},
{
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},
{
"@id": "/rodent-donors/IGVFDO2319OUEC/",
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],
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},
{
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],
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},
{
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{
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{
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{
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{
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{
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{
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},
{
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{
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},
{
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},
{
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],
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},
{
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},
{
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],
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},
{
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},
{
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},
{
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},
{
"@id": "/rodent-donors/IGVFDO9510ILZG/",
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],
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},
{
"@id": "/rodent-donors/IGVFDO2645GUSC/",
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],
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},
{
"@id": "/rodent-donors/IGVFDO0813DZTW/",
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],
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},
{
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],
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},
{
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],
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},
{
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],
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},
{
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],
"sex": "male",
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},
{
"@id": "/rodent-donors/IGVFDO8904OIIT/",
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],
"sex": "female",
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"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9142EUBJ/",
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],
"sex": "female",
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"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
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