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MeasurementSet
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IGVFDS5528ZTLH
IGVFDS5528ZTLH
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File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
Homo sapiens (male, 86 years) cerebellar cortex tissue
Protocols
https://www.protocols.io/view/isolation-of-nuclei-from-frozen-tissue-for-snmulti-6uchesw
https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn
Aliases
igvf:corces_measurementSet_X004_G3_RNA
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Results (Illumina)
2 items
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI4079XVLD
fastq
reads
R1
1
Read 1
Illumina NovaSeq 6000
H5TLFDSX5
1
16 GB
Ryan Corces, Gladstone Institute UCSF
validated
IGVFFI7279RHVG
fastq
reads
R2
1
Read 2
Illumina NovaSeq 6000
H5TLFDSX5
1
14 GB
Ryan Corces, Gladstone Institute UCSF
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM9133DPZS
Tissue
cerebellar cortex
Homo sapiens (male, 86 years) cerebellar cortex tissue
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO9236YUAT
igvf:corces_donor_BANN0227
male
Homo sapiens
Related Multiome Datasets
1 item
Accession
Type
Summary
Aliases
Lab
IGVFDS5735HWHA
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
igvf:corces_measurementSet_X004_G3_ATAC
Ryan Corces, Gladstone Institute UCSF