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IGVFDS5523WWKM

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File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Description
Colitis_recovered_adenoma APC01-A1-7B,APC01-B1-4B; Control_adenoma APC01-A1-11B,APC01-A1-13B,APC01-B1-6B
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • colon tissue, Mus musculus C57BL/6J
Protocols
Aliases
buenrostro-bernstein:surya-mouse-colon_mm-set28

Sequencing Results (Illumina)

2 items
Read Names
fastq
reads
R1
1
Read 1
3.0 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1
Read 2
3.5 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
colon tissue, Mus musculus C57BL/6J

Donors

5 items
Aliases
  • buenrostro-bernstein:surya-APC01-B1-6B
unspecified
Mus musculus
  • buenrostro-bernstein:surya-APC01-B1-4B
unspecified
Mus musculus
  • buenrostro-bernstein:surya-APC01-A1-7B
unspecified
Mus musculus
  • buenrostro-bernstein:surya-APC01-A1-11B
unspecified
Mus musculus
  • buenrostro-bernstein:surya-APC01-A1-13B
unspecified
Mus musculus

Related Multiome Datasets

4 items
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:surya-mouse-colon_mm-set29
Jason Buenrostro, Broad
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:surya-mouse-colon_mm-set26
Jason Buenrostro, Broad
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:surya-mouse-colon_mm-set25
Jason Buenrostro, Broad
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:surya-mouse-colon_mm-set27
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad