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INDEXED
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MeasurementSet
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IGVFDS5502HMZW
IGVFDS5502HMZW
released
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Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C37_day1
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0241KPYZ
fastq
reads
R2
2
Illumina NovaSeq X
8
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI0320PFBW
fastq
reads
R2
2
Illumina NovaSeq X
2
3.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI0369YERC
fastq
reads
R2
2
Illumina NovaSeq X
3
3.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI1765WPWV
fastq
reads
R1
1
Illumina NovaSeq X
1
3.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI2625XTYD
fastq
reads
R2
2
Illumina NovaSeq X
6
3.4 GB
Chongyuan Luo, UCLA
validated
IGVFFI3261ICHK
fastq
reads
R2
2
Illumina NovaSeq X
4
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI3954KKZG
fastq
reads
R1
1
Illumina NovaSeq X
3
3.2 GB
Chongyuan Luo, UCLA
validated
IGVFFI4976DDLO
fastq
reads
R1
1
Illumina NovaSeq X
6
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI5176KXDA
fastq
reads
R2
2
Illumina NovaSeq X
1
3.3 GB
Chongyuan Luo, UCLA
validated
IGVFFI5757DEGU
fastq
reads
R1
1
Illumina NovaSeq X
2
3.3 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM6554EKLI
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO0351NYZH
chongyuan-luo:C37
unspecified
Homo sapiens