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IGVFDS5473KODL

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 180)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 445
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

33 items
Read Names
fastq
reads
R1
8569
Read 1
22LMVNLT4
1.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8761
Barcode index
22LMVNLT4
977 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8953
Read 1
22LMVNLT4
1.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8665
Read 1
22LMVNLT4
1.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8473
Read 2
22LMVNLT4
1.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9049
Read 1
22LMVNLT4
1.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8473
Read 1
22LMVNLT4
1.8 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4035
Read 1
22523KLT3
2.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4071
Read 1
22523KLT3
2.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8953
Read 2
22LMVNLT4
1.6 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 180)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 364
Jason Buenrostro, Broad