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IGVFDS5273QVEC

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This object is in preview status. Metadata is subject to change until this object is released.
File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples
Protocols
Aliases
igvf:corces_measurementSet_RP002_G7_RNA
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Results (Illumina)

16 items
Read Names
fastq
reads
R2
1
Read 2
223JJGLT3
4
3.6 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
223JJGLT3
4
457 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R2
1
Read 2
223JJGLT3
1
3.2 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
223JJGLT3
3
459 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R1
1
Read 1
223JJGLT3
4
1.6 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R2
1
Read 2
223JJGLT3
2
3.3 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R1
1
Read 1
223JJGLT3
1
1.5 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R2
1
Read 2
223JJGLT3
3
3.6 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
223JJGLT3
1
416 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R1
1
Read 1
223JJGLT3
2
1.5 GB
Ryan Corces, Gladstone Institute UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples

Donors

12 items
Aliases
  • igvf:corces_donor_BANN0218
male
Homo sapiens
  • igvf:corces_donor_BANN1030
male
Homo sapiens
  • igvf:corces_donor_BANN1340
male
Homo sapiens
  • igvf:corces_donor_BANN0325
male
Homo sapiens
  • igvf:corces_donor_BANN0129
male
Homo sapiens
  • igvf:corces_donor_BANN1644
male
Homo sapiens
  • igvf:corces_donor_BANN1632
male
Homo sapiens
  • igvf:corces_donor_BANN1614
male
Homo sapiens
  • igvf:corces_donor_BANN9902
female
Homo sapiens
  • igvf:corces_donor_BANN1756
male
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_RP002_G7_ATAC
Ryan Corces, Gladstone Institute UCSF