{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS5202ZKVR/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS5202ZKVR",
"aliases": [
"ali-mortazavi:011_67C_illumina"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "missing publication",
"detail": "Measurement set [IGVFDS5202ZKVR](/measurement-sets/IGVFDS5202ZKVR/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS5202ZKVR/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS5202ZKVR](/measurement-sets/IGVFDS5202ZKVR/) has in progress subobject tabular file [IGVFFI1138MCVX](/tabular-files/IGVFFI1138MCVX/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS5202ZKVR/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS5202ZKVR](/measurement-sets/IGVFDS5202ZKVR/) has in progress subobject tabular file [IGVFFI2591OFQO](/tabular-files/IGVFFI2591OFQO/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS5202ZKVR/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000646](/sample-terms/NTR_0000646/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000646/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000750](/sample-terms/NTR_0000750/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000750/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000647](/sample-terms/NTR_0000647/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000647/"
},
{
"category": "NTR term ID",
"detail": "Sample term for [NTR_0000751](/sample-terms/NTR_0000751/) has been newly requested. Ontology terms with a newly requested term ID are expected to have it updated following its addition to the appropriate ontology database.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_ntr_term_id",
"path": "/sample-terms/NTR_0000751/"
},
{
"category": "mismatched status",
"detail": "Released multiplexed sample [IGVFSM1116LSTK](/multiplexed-samples/IGVFSM1116LSTK/) has in progress subobject tabular file [IGVFFI5536TVIR](/tabular-files/IGVFFI5536TVIR/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/multiplexed-samples/IGVFSM1116LSTK/"
},
{
"category": "missing publication",
"detail": "Multiplexed sample [IGVFSM1116LSTK](/multiplexed-samples/IGVFSM1116LSTK/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/multiplexed-samples/IGVFSM1116LSTK/"
}
]
},
"award": {
"@id": "/awards/HG012077/",
"component": "mapping",
"contact_pi": {
"@id": "/users/2c33e192-e815-4384-a220-72a0992cbe24/",
"title": "Ali Mortazavi"
},
"title": "Center for Mouse Genomic Variation at Single Cell Resolution"
},
"control_for": [],
"creation_timestamp": "2023-10-14T20:41:05.003752+00:00",
"data_use_limitation_summaries": [
"no certificate"
],
"donors": [
{
"@id": "/rodent-donors/IGVFDO6607QZPA/",
"accession": "IGVFDO6607QZPA",
"aliases": [
"ali-mortazavi:050_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0430HQIU/",
"accession": "IGVFDO0430HQIU",
"aliases": [
"ali-mortazavi:041_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3436ZMLY/",
"accession": "IGVFDO3436ZMLY",
"aliases": [
"ali-mortazavi:091_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5177QEWF/",
"accession": "IGVFDO5177QEWF",
"aliases": [
"ali-mortazavi:063_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6066JIEJ/",
"accession": "IGVFDO6066JIEJ",
"aliases": [
"ali-mortazavi:043_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6141KSSQ/",
"accession": "IGVFDO6141KSSQ",
"aliases": [
"ali-mortazavi:024_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5810HOHC/",
"accession": "IGVFDO5810HOHC",
"aliases": [
"ali-mortazavi:064_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5502NJPS/",
"accession": "IGVFDO5502NJPS",
"aliases": [
"ali-mortazavi:038_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0696DMIA/",
"accession": "IGVFDO0696DMIA",
"aliases": [
"ali-mortazavi:057_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8958JQIY/",
"accession": "IGVFDO8958JQIY",
"aliases": [
"ali-mortazavi:047_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5523UFUN/",
"accession": "IGVFDO5523UFUN",
"aliases": [
"ali-mortazavi:070_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3207TERA/",
"accession": "IGVFDO3207TERA",
"aliases": [
"ali-mortazavi:086_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7062NBTQ/",
"accession": "IGVFDO7062NBTQ",
"aliases": [
"ali-mortazavi:079_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8698PVAJ/",
"accession": "IGVFDO8698PVAJ",
"aliases": [
"ali-mortazavi:034_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3603MEIO/",
"accession": "IGVFDO3603MEIO",
"aliases": [
"ali-mortazavi:084_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6219LVKW/",
"accession": "IGVFDO6219LVKW",
"aliases": [
"ali-mortazavi:032_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2831PZHE/",
"accession": "IGVFDO2831PZHE",
"aliases": [
"ali-mortazavi:077_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8152XDDC/",
"accession": "IGVFDO8152XDDC",
"aliases": [
"ali-mortazavi:090_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2301HIUQ/",
"accession": "IGVFDO2301HIUQ",
"aliases": [
"ali-mortazavi:067_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0853BCOL/",
"accession": "IGVFDO0853BCOL",
"aliases": [
"ali-mortazavi:058_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1643VEDI/",
"accession": "IGVFDO1643VEDI",
"aliases": [
"ali-mortazavi:019_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9340WGNV/",
"accession": "IGVFDO9340WGNV",
"aliases": [
"ali-mortazavi:037_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0624KKTV/",
"accession": "IGVFDO0624KKTV",
"aliases": [
"ali-mortazavi:030_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7255VZBN/",
"accession": "IGVFDO7255VZBN",
"aliases": [
"ali-mortazavi:062_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0681EHNP/",
"accession": "IGVFDO0681EHNP",
"aliases": [
"ali-mortazavi:052_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4788BIQB/",
"accession": "IGVFDO4788BIQB",
"aliases": [
"ali-mortazavi:020_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2319OUEC/",
"accession": "IGVFDO2319OUEC",
"aliases": [
"ali-mortazavi:045_129S1J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2517TXOT/",
"accession": "IGVFDO2517TXOT",
"aliases": [
"ali-mortazavi:092_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5872DFML/",
"accession": "IGVFDO5872DFML",
"aliases": [
"ali-mortazavi:094_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7254QNQZ/",
"accession": "IGVFDO7254QNQZ",
"aliases": [
"ali-mortazavi:031_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7951JDSP/",
"accession": "IGVFDO7951JDSP",
"aliases": [
"ali-mortazavi:026_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6124WGNO/",
"accession": "IGVFDO6124WGNO",
"aliases": [
"ali-mortazavi:042_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9374WXKK/",
"accession": "IGVFDO9374WXKK",
"aliases": [
"ali-mortazavi:028_AJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3762EAWT/",
"accession": "IGVFDO3762EAWT",
"aliases": [
"ali-mortazavi:076_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0751WQHI/",
"accession": "IGVFDO0751WQHI",
"aliases": [
"ali-mortazavi:080_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5539RLXJ/",
"accession": "IGVFDO5539RLXJ",
"aliases": [
"ali-mortazavi:029_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7957DMLJ/",
"accession": "IGVFDO7957DMLJ",
"aliases": [
"ali-mortazavi:033_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9890MXGN/",
"accession": "IGVFDO9890MXGN",
"aliases": [
"ali-mortazavi:068_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6112GRYR/",
"accession": "IGVFDO6112GRYR",
"aliases": [
"ali-mortazavi:059_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2292YGGE/",
"accession": "IGVFDO2292YGGE",
"aliases": [
"ali-mortazavi:049_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7610XXRR/",
"accession": "IGVFDO7610XXRR",
"aliases": [
"ali-mortazavi:072_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9199TPBC/",
"accession": "IGVFDO9199TPBC",
"aliases": [
"ali-mortazavi:071_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1452VDIT/",
"accession": "IGVFDO1452VDIT",
"aliases": [
"ali-mortazavi:035_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4707SGWM/",
"accession": "IGVFDO4707SGWM",
"aliases": [
"ali-mortazavi:051_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5258MBVH/",
"accession": "IGVFDO5258MBVH",
"aliases": [
"ali-mortazavi:040_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2106EEWB/",
"accession": "IGVFDO2106EEWB",
"aliases": [
"ali-mortazavi:078_PWKJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4546RHSG/",
"accession": "IGVFDO4546RHSG",
"aliases": [
"ali-mortazavi:027_AJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "A/J (AJ)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9510ILZG/",
"accession": "IGVFDO9510ILZG",
"aliases": [
"ali-mortazavi:053_NZOJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO2645GUSC/",
"accession": "IGVFDO2645GUSC",
"aliases": [
"ali-mortazavi:060_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0813DZTW/",
"accession": "IGVFDO0813DZTW",
"aliases": [
"ali-mortazavi:069_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9202WGJZ/",
"accession": "IGVFDO9202WGJZ",
"aliases": [
"ali-mortazavi:085_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1477BPVO/",
"accession": "IGVFDO1477BPVO",
"aliases": [
"ali-mortazavi:088_CASTJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3640WUBU/",
"accession": "IGVFDO3640WUBU",
"aliases": [
"ali-mortazavi:066_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5737FRWD/",
"accession": "IGVFDO5737FRWD",
"aliases": [
"ali-mortazavi:081_PWKJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "PWK/PhJ (PWK)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8904OIIT/",
"accession": "IGVFDO8904OIIT",
"aliases": [
"ali-mortazavi:044_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9142EUBJ/",
"accession": "IGVFDO9142EUBJ",
"aliases": [
"ali-mortazavi:096_WSBJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO7007WBAX/",
"accession": "IGVFDO7007WBAX",
"aliases": [
"ali-mortazavi:016_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5183UZGS/",
"accession": "IGVFDO5183UZGS",
"aliases": [
"ali-mortazavi:021_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3655FKMR/",
"accession": "IGVFDO3655FKMR",
"aliases": [
"ali-mortazavi:025_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4725SNCJ/",
"accession": "IGVFDO4725SNCJ",
"aliases": [
"ali-mortazavi:017_B6J_10M"
],
"sex": "male",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO0026YRCR/",
"accession": "IGVFDO0026YRCR",
"aliases": [
"ali-mortazavi:018_B6J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "C57BL/6J (B6)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO1744FDIX/",
"accession": "IGVFDO1744FDIX",
"aliases": [
"ali-mortazavi:036_129S1J_10F"
],
"sex": "female",
"status": "released",
"strain_background": "129S1/SvImJ (129)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO6614NNPY/",
"accession": "IGVFDO6614NNPY",
"aliases": [
"ali-mortazavi:089_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO4469VYEZ/",
"accession": "IGVFDO4469VYEZ",
"aliases": [
"ali-mortazavi:073_NODJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO5085MJSP/",
"accession": "IGVFDO5085MJSP",
"aliases": [
"ali-mortazavi:048_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8322VYDU/",
"accession": "IGVFDO8322VYDU",
"aliases": [
"ali-mortazavi:093_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO9560CEGZ/",
"accession": "IGVFDO9560CEGZ",
"aliases": [
"ali-mortazavi:061_WSBJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "WSB/EiJ (WSB)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3662UKFW/",
"accession": "IGVFDO3662UKFW",
"aliases": [
"ali-mortazavi:087_CASTJ_10M"
],
"sex": "male",
"status": "released",
"strain_background": "CAST/EiJ (CAST)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO8276XXVT/",
"accession": "IGVFDO8276XXVT",
"aliases": [
"ali-mortazavi:074_NODJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NOD/ShiLtJ (NOD)",
"taxa": "Mus musculus"
},
{
"@id": "/rodent-donors/IGVFDO3534MDFF/",
"accession": "IGVFDO3534MDFF",
"aliases": [
"ali-mortazavi:046_NZOJ_10F"
],
"sex": "female",
"status": "released",
"strain_background": "NZO/H1LtJ (NZO)",
"taxa": "Mus musculus"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI3448MYZD/",
"accession": "IGVFFI3448MYZD",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-14T23:55:24.877931+00:00",
"file_format": "fastq",
"file_size": 7179988123,
"href": "/sequence-files/IGVFFI3448MYZD/@@download/IGVFFI3448MYZD.fastq.gz",
"md5sum": "02c983181cc596fc8f134ff2534f68b0",
"s3_uri": "s3://igvf-files/2023/10/14/2d0eff93-1418-41b0-b4fd-1362ff354460/IGVFFI3448MYZD.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B04_D_nova_N1_L003_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1008KNHI/",
"accession": "IGVFFI1008KNHI",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:05:19.504922+00:00",
"file_format": "fastq",
"file_size": 7065754551,
"href": "/sequence-files/IGVFFI1008KNHI/@@download/IGVFFI1008KNHI.fastq.gz",
"md5sum": "d39cb63b23bd4fc8a526a9eeaacd5fd0",
"s3_uri": "s3://igvf-files/2023/10/15/27b3e5db-5ef9-4da5-a331-97e2da5b9804/IGVFFI1008KNHI.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B04_D_nova_N1_L004_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2942UWJL/",
"accession": "IGVFFI2942UWJL",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-14T23:48:49.235633+00:00",
"file_format": "fastq",
"file_size": 13331781862,
"href": "/sequence-files/IGVFFI2942UWJL/@@download/IGVFFI2942UWJL.fastq.gz",
"md5sum": "ae5d8a1ceb1a9059a7ae0fe61a8ac16a",
"s3_uri": "s3://igvf-files/2023/10/14/6db8aef6-1988-4da0-8c56-638f56c4d4d0/IGVFFI2942UWJL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B04_D_nova_N1_L003_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6055ZPOC/",
"accession": "IGVFFI6055ZPOC",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-14T23:28:51.795950+00:00",
"file_format": "fastq",
"file_size": 13343634383,
"href": "/sequence-files/IGVFFI6055ZPOC/@@download/IGVFFI6055ZPOC.fastq.gz",
"md5sum": "2d6fe3d2bbe2939404e54be2b9b76e79",
"s3_uri": "s3://igvf-files/2023/10/14/668e2037-a88e-4d88-b884-390a188233b5/IGVFFI6055ZPOC.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B04_D_nova_N1_L001_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6507CBLG/",
"accession": "IGVFFI6507CBLG",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-14T23:38:49.680109+00:00",
"file_format": "fastq",
"file_size": 13358466169,
"href": "/sequence-files/IGVFFI6507CBLG/@@download/IGVFFI6507CBLG.fastq.gz",
"md5sum": "7aecede6e48011a83f9b23b015b9ddf9",
"s3_uri": "s3://igvf-files/2023/10/14/b63f3cf2-e33b-4dac-bea7-598b0e071762/IGVFFI6507CBLG.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B04_D_nova_N1_L002_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6854ZUAV/",
"accession": "IGVFFI6854ZUAV",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-14T23:58:58.318978+00:00",
"file_format": "fastq",
"file_size": 13023975911,
"href": "/sequence-files/IGVFFI6854ZUAV/@@download/IGVFFI6854ZUAV.fastq.gz",
"md5sum": "de5ad3faf025a989d0202faa288a4050",
"s3_uri": "s3://igvf-files/2023/10/14/31e964d8-f043-4a4f-951a-5417db6e2cdf/IGVFFI6854ZUAV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B04_D_nova_N1_L004_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7115ZVXN/",
"accession": "IGVFFI7115ZVXN",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:18:01.669360+00:00",
"file_format": "fastq",
"file_size": 12712289116,
"href": "/sequence-files/IGVFFI7115ZVXN/@@download/IGVFFI7115ZVXN.fastq.gz",
"md5sum": "843c8d695c3d829516a551c09ce2198f",
"s3_uri": "s3://igvf-files/2023/10/15/78cbd04c-616c-4c06-8770-0a84e29c5170/IGVFFI7115ZVXN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B04_D_nova_N2_L002_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2753LSRO/",
"accession": "IGVFFI2753LSRO",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:14:43.231081+00:00",
"file_format": "fastq",
"file_size": 6677575499,
"href": "/sequence-files/IGVFFI2753LSRO/@@download/IGVFFI2753LSRO.fastq.gz",
"md5sum": "c1605a6f52fa04fc490381b81453b0eb",
"s3_uri": "s3://igvf-files/2023/10/15/b0e5e3da-8fe2-43b5-9dcb-7ba4583b4ade/IGVFFI2753LSRO.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B04_D_nova_N2_L001_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7507PBLX/",
"accession": "IGVFFI7507PBLX",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:08:47.785193+00:00",
"file_format": "fastq",
"file_size": 12380213444,
"href": "/sequence-files/IGVFFI7507PBLX/@@download/IGVFFI7507PBLX.fastq.gz",
"md5sum": "d68aa177ad213a780be7259dae7bcf46",
"s3_uri": "s3://igvf-files/2023/10/15/5bf7a49d-5a76-4bea-bfce-99e82d1154c5/IGVFFI7507PBLX.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B04_D_nova_N2_L001_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8679KYXE/",
"accession": "IGVFFI8679KYXE",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:27:28.524349+00:00",
"file_format": "fastq",
"file_size": 12326706901,
"href": "/sequence-files/IGVFFI8679KYXE/@@download/IGVFFI8679KYXE.fastq.gz",
"md5sum": "3c6746b8924c74cff43727ae9bacf28c",
"s3_uri": "s3://igvf-files/2023/10/15/d6d0f966-856d-4e1d-910e-eab9253e3cd1/IGVFFI8679KYXE.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B04_D_nova_N2_L003_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1401KSGQ/",
"accession": "IGVFFI1401KSGQ",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:42:40.056425+00:00",
"file_format": "fastq",
"file_size": 6664417905,
"href": "/sequence-files/IGVFFI1401KSGQ/@@download/IGVFFI1401KSGQ.fastq.gz",
"md5sum": "67daa98c4485741904f3ccaf14241456",
"s3_uri": "s3://igvf-files/2023/10/15/01e7e336-b70a-4cc2-aac2-4b45a46eda43/IGVFFI1401KSGQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B04_D_nova_N2_L004_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0558FFRR/",
"accession": "IGVFFI0558FFRR",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:24:04.057648+00:00",
"file_format": "fastq",
"file_size": 6781452441,
"href": "/sequence-files/IGVFFI0558FFRR/@@download/IGVFFI0558FFRR.fastq.gz",
"md5sum": "32d61f3dd9cf66f9a8ba11bba09b8a7c",
"s3_uri": "s3://igvf-files/2023/10/15/dd3536c5-4973-4aaf-ac88-0188de723b8f/IGVFFI0558FFRR.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B04_D_nova_N2_L002_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI1382YXDT/",
"accession": "IGVFFI1382YXDT",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-14T23:35:17.587458+00:00",
"file_format": "fastq",
"file_size": 7289185340,
"href": "/sequence-files/IGVFFI1382YXDT/@@download/IGVFFI1382YXDT.fastq.gz",
"md5sum": "0306981a9b84b1826da99cc98dad3ef6",
"s3_uri": "s3://igvf-files/2023/10/14/1ea09c2c-6cd4-4013-b59f-f2086f876454/IGVFFI1382YXDT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B04_D_nova_N1_L001_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4676LJSJ/",
"accession": "IGVFFI4676LJSJ",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-14T23:45:20.536290+00:00",
"file_format": "fastq",
"file_size": 7255474689,
"href": "/sequence-files/IGVFFI4676LJSJ/@@download/IGVFFI4676LJSJ.fastq.gz",
"md5sum": "36940cbe740d2d9b7ad7520784405fd2",
"s3_uri": "s3://igvf-files/2023/10/14/7661ad22-a217-4493-a993-eb5a650569eb/IGVFFI4676LJSJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova1/igvf_011_B04_D_nova_N1_L002_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI2826NUQP/",
"accession": "IGVFFI2826NUQP",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:33:13.430946+00:00",
"file_format": "fastq",
"file_size": 6605183968,
"href": "/sequence-files/IGVFFI2826NUQP/@@download/IGVFFI2826NUQP.fastq.gz",
"md5sum": "6a4b9050c8242aae5799b55ac301a005",
"s3_uri": "s3://igvf-files/2023/10/15/454ab9c6-afbc-41dc-9aa7-49f1a671d7c1/IGVFFI2826NUQP.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B04_D_nova_N2_L003_R2.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3740PAYV/",
"accession": "IGVFFI3740PAYV",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-10-15T00:36:35.767743+00:00",
"file_format": "fastq",
"file_size": 12429541998,
"href": "/sequence-files/IGVFFI3740PAYV/@@download/IGVFFI3740PAYV.fastq.gz",
"md5sum": "3053588f6fe58157de472c22007baa0c",
"s3_uri": "s3://igvf-files/2023/10/15/57ec3cb7-3a04-4154-bee2-4c17b406c2f8/IGVFFI3740PAYV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0008637/",
"status": "released",
"term_name": "Illumina NovaSeq 6000"
},
"status": "released",
"submitted_file_name": "igvf_011/nova2/igvf_011_B04_D_nova_N2_L004_R1.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI1326FJJK/",
"accession": "IGVFFI1326FJJK",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:05:55.820669+00:00",
"file_format": "yaml",
"file_size": 1350,
"href": "/configuration-files/IGVFFI1326FJJK/@@download/IGVFFI1326FJJK.yaml.gz",
"md5sum": "6a40740be2020f43b9f9f886e324d898",
"s3_uri": "s3://igvf-files/2024/09/18/13d0ccae-cfa8-4c95-961d-c51520aca35c/IGVFFI1326FJJK.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI3482KNSZ/",
"accession": "IGVFFI3482KNSZ",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:05:53.310069+00:00",
"file_format": "yaml",
"file_size": 1354,
"href": "/configuration-files/IGVFFI3482KNSZ/@@download/IGVFFI3482KNSZ.yaml.gz",
"md5sum": "6bfea9fca8ca52f5ff3052eafadae440",
"s3_uri": "s3://igvf-files/2024/09/18/f0c19f1f-ccaf-4eb8-83cc-ead8f31c00d9/IGVFFI3482KNSZ.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI1474GLOE/",
"accession": "IGVFFI1474GLOE",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:05:54.589985+00:00",
"file_format": "yaml",
"file_size": 1352,
"href": "/configuration-files/IGVFFI1474GLOE/@@download/IGVFFI1474GLOE.yaml.gz",
"md5sum": "e423e62b4c8effb85c7e3b17073eca8f",
"s3_uri": "s3://igvf-files/2024/09/18/50ed7f67-dd05-4a1a-ae92-4ca928aeee8d/IGVFFI1474GLOE.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI4113BWRJ/",
"accession": "IGVFFI4113BWRJ",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:05:50.760085+00:00",
"file_format": "yaml",
"file_size": 1354,
"href": "/configuration-files/IGVFFI4113BWRJ/@@download/IGVFFI4113BWRJ.yaml.gz",
"md5sum": "c4e517f491b9d99c95bcc089de8e2c30",
"s3_uri": "s3://igvf-files/2024/09/18/6439d192-5b94-4bf9-970f-84f78e382229/IGVFFI4113BWRJ.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI0589ISKO/",
"accession": "IGVFFI0589ISKO",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:05:52.040422+00:00",
"file_format": "yaml",
"file_size": 1353,
"href": "/configuration-files/IGVFFI0589ISKO/@@download/IGVFFI0589ISKO.yaml.gz",
"md5sum": "d8494efd68135b35c7c791e7a1b98962",
"s3_uri": "s3://igvf-files/2024/09/18/4db324e9-539b-41b4-b657-126ea094fe9c/IGVFFI0589ISKO.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI1979VNYC/",
"accession": "IGVFFI1979VNYC",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:05:58.305366+00:00",
"file_format": "yaml",
"file_size": 1351,
"href": "/configuration-files/IGVFFI1979VNYC/@@download/IGVFFI1979VNYC.yaml.gz",
"md5sum": "6ad5cb45c8125ff9714b0e2679204298",
"s3_uri": "s3://igvf-files/2024/09/18/59a5276a-5813-4b2c-93db-3cf7a93e96e9/IGVFFI1979VNYC.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI2503ESGI/",
"accession": "IGVFFI2503ESGI",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:05:59.693112+00:00",
"file_format": "yaml",
"file_size": 1352,
"href": "/configuration-files/IGVFFI2503ESGI/@@download/IGVFFI2503ESGI.yaml.gz",
"md5sum": "e4c6f2ee89dd49c68cd7a4181b741d8c",
"s3_uri": "s3://igvf-files/2024/09/18/6e578e45-1dff-484f-8ef3-17a0f56630c3/IGVFFI2503ESGI.yaml.gz",
"status": "released",
"upload_status": "validated"
},
{
"@id": "/configuration-files/IGVFFI7944DGCQ/",
"accession": "IGVFFI7944DGCQ",
"content_type": "seqspec",
"creation_timestamp": "2024-09-18T18:05:57.071378+00:00",
"file_format": "yaml",
"file_size": 1353,
"href": "/configuration-files/IGVFFI7944DGCQ/@@download/IGVFFI7944DGCQ.yaml.gz",
"md5sum": "2560a8fc371ccc6e2bc54fcd8cec1f72",
"s3_uri": "s3://igvf-files/2024/09/18/10db8d2b-9f3e-4e5c-8e5b-2f9c22f43b9e/IGVFFI7944DGCQ.yaml.gz",
"status": "released",
"upload_status": "validated"
}
],
"input_for": [
"/analysis-sets/IGVFDS4236OFZI/"
],
"lab": {
"@id": "/labs/ali-mortazavi/",
"title": "Ali Mortazavi, UCI"
},
"notes": "Preferred_assay_titles enum Parse Split-seq has been renamed to be Parse SPLiT-seq.",
"onlist_files": [
"/tabular-files/IGVFFI2591OFQO/",
"/tabular-files/IGVFFI1138MCVX/"
],
"onlist_method": "multi",
"preferred_assay_title": "Parse SPLiT-seq",
"protocols": [
"https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-flash-froz-eq2lyj17rlx9/v1",
"https://www.protocols.io/view/protocol-to-isolate-and-fix-nuclei-from-flash-froz-n2bvj3noplk5/v2",
"https://www.protocols.io/view/evercode-wt-mega-v2-2-1-8epv5xxrng1b/v1",
"https://www.protocols.io/view/evercode-single-index-pcr-5jyl82k9rl2w/v1"
],
"release_timestamp": "2025-04-19T01:34:32.108606+00:00",
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM1116LSTK/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM1116LSTK",
"aliases": [
"ali-mortazavi:subpool_011_67C"
],
"cellular_sub_pool": "011_67C",
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [],
"institutional_certificates": [],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/NTR_0000646/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "left cerebral cortex",
"term_name": "left cerebral cortex"
},
{
"@id": "/sample-terms/NTR_0000647/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "right cerebral cortex",
"term_name": "right cerebral cortex"
},
{
"@id": "/sample-terms/NTR_0000750/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "left hippocampal formation",
"term_name": "left hippocampal formation"
},
{
"@id": "/sample-terms/NTR_0000751/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "right hippocampal formation",
"term_name": "right hippocampal formation"
},
{
"@id": "/sample-terms/UBERON_0001388/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "released",
"summary": "gastrocnemius",
"term_name": "gastrocnemius"
}
],
"status": "released",
"summary": "multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus NZO/H1LtJ (male, 69 days) left hippocampal formation tissue; ... and 190 more samples",
"taxa": "Mus musculus",
"treatments": []
}
],
"schema_version": "26",
"sequencing_library_types": [
"mRNA enriched"
],
"status": "released",
"strand_specificity": "5 prime to 3 prime",
"submitted_by": {
"@id": "/users/ebd1025b-e3ab-4e51-bfcd-1415f278281a/",
"title": "Diane Trout"
},
"submitted_files_timestamp": "2023-10-14T23:28:51.795950+00:00",
"summary": "Parse SPLiT-seq",
"uuid": "f7efb177-b224-4e53-9678-94538042f631"
}