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IGVFDS5169NLGU

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 208)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 603
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
R2
8713
Read 2
22LMVNLT4
441 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4390
Read 2
H75F7DSX5
618 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8809
Barcode index
22LMVNLT4
260 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9193
Read 2
22LMVNLT4
405 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8521
Barcode index
22LMVNLT4
270 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
3857
Read 2
22523KLT3
252 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3893
Barcode index
22523KLT3
216 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
3857
Barcode index
22523KLT3
216 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8521
Read 1
22LMVNLT4
465 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
4354
Barcode index
H75F7DSX5
514 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 208)

Donors

99 items
Aliases
  • buenrostro-bernstein:Donor 1943
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1909
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1937
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1907
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1963
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1952
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1946
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1982
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1975
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 246
Jason Buenrostro, Broad