IGVFDS5136IOHS

released

GRU

File Set Type

experimental data

Summary

single-cell ATAC-seq (SHARE-seq)

Assay Term

single-cell ATAC-seq

Sample Summaries

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 163)

Protocols

https://www.protocols.io/view/share-seq-protocol-v2-2-di3y4gpw

Aliases

buenrostro-bernstein:scATAC Lib 346

Submitter Comment

Does not have corresponding scRNA seq MeasurementSet due to failed QC

Attribution

Jason Buenrostro, Broad

(

HG011986 — Jason Buenrostro

)

Sequencing Results (Illumina)

3 items

Read Names

IGVFFI2893FMWR

fastq

reads

4417

Barcode index

IGVFFI6951YHQA

Illumina NovaSeq X

22JMFMLT3

3.1 GB

Jason Buenrostro, Broad

validated

IGVFFI4534ONTR

fastq

reads

4417

IGVFFI6951YHQA

Illumina NovaSeq X

22JMFMLT3

5.3 GB

Jason Buenrostro, Broad

validated

IGVFFI9478JVVA

fastq

reads

4417

IGVFFI6951YHQA

Illumina NovaSeq X

22JMFMLT3

5.1 GB

Jason Buenrostro, Broad

validated

Samples

1 item

Accession

Type

Sample Terms

Associated Construct Library Sets

Summary

IGVFSM7592EOAW

InVitroSystem

induced pluripotent stem cell

Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 163)