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IGVFDS5101CRBD

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 179)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 441
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
I1
8853
Barcode index
22LMVNLT4
341 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8949
Read 2
22LMVNLT4
536 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
977
Barcode index
22773CLT3
320 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1019
Read 2
22773CLT3
363 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8853
Read 1
22LMVNLT4
590 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1019
Barcode index
22773CLT3
321 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
977
Read 2
22773CLT3
360 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8469
Read 1
22LMVNLT4
608 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8565
Barcode index
22LMVNLT4
339 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1061
Read 2
22773CLT3
359 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 179)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 432
Jason Buenrostro, Broad