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IGVFDS5081XXKG

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 179)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 440
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
R2
934
Read 2
22773CLT3
420 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8852
Barcode index
22LMVNLT4
399 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8852
Read 1
22LMVNLT4
686 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1018
Barcode index
22773CLT3
378 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9140
Barcode index
22LMVNLT4
378 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8468
Read 2
22LMVNLT4
683 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
1060
Barcode index
22773CLT3
371 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8852
Read 2
22LMVNLT4
660 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8660
Read 2
22LMVNLT4
667 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
9140
Read 2
22LMVNLT4
614 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 179)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 431
Jason Buenrostro, Broad