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IGVFDS4920HAWH

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (26 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 13
buenrostro-bernstein:scATAC Lib 13

Sequencing Results (Illumina)

16 items
fastq
reads
R2
2357
944 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2261
548 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2261
940 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2453
550 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1495
1.2 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1399
2.3 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1591
3.0 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1495
2.2 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2453
939 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2357
551 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 3), male, Homo sapiens (26 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1506
  • buenrostro-bernstein:Donor 1506
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 13
  • buenrostro-bernstein:scRNA Lib 13
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad