IGVFDS4898CUZT

1{
2    "@context": "/terms/",
3    "@id": "/measurement-sets/IGVFDS4898CUZT/",
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7        "Item"
8    ],
9    "accession": "IGVFDS4898CUZT",
10    "aliases": [
11        "buenrostro-bernstein:scATAC Lib 396"
12    ],
13    "assay_term": {
14        "@id": "/assay-terms/OBI_0002764/",
15        "assay_slims": [
16            "chromatin accessibility"
17        ],
18        "status": "released",
19        "term_name": "single-cell ATAC-seq"
20    },
21    "audit": {
22        "INTERNAL_ACTION": [
23            {
24                "category": "missing publication",
25                "detail": "Measurement set [IGVFDS4898CUZT](/measurement-sets/IGVFDS4898CUZT/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
26                "level": 30,
27                "level_name": "INTERNAL_ACTION",
28                "name": "audit_file_set_missing_publication",
29                "path": "/measurement-sets/IGVFDS4898CUZT/"
30            },
31            {
32                "category": "mismatched status",
33                "detail": "Released measurement set [IGVFDS4898CUZT](/measurement-sets/IGVFDS4898CUZT/) has in progress subobject tabular file [IGVFFI0400MBIM](/tabular-files/IGVFFI0400MBIM/).",
34                "level": 30,
35                "level_name": "INTERNAL_ACTION",
36                "name": "audit_item_status",
37                "path": "/measurement-sets/IGVFDS4898CUZT/"
38            },
39            {
40                "category": "mismatched status",
41                "detail": "Released measurement set [IGVFDS4898CUZT](/measurement-sets/IGVFDS4898CUZT/) has in progress subobject tabular file [IGVFFI5522PXUM](/tabular-files/IGVFFI5522PXUM/).",
42                "level": 30,
43                "level_name": "INTERNAL_ACTION",
44                "name": "audit_item_status",
45                "path": "/measurement-sets/IGVFDS4898CUZT/"
46            },
47            {
48                "category": "missing publication",
49                "detail": "In vitro system [IGVFSM8804KQRM](/in-vitro-systems/IGVFSM8804KQRM/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
50                "level": 30,
51                "level_name": "INTERNAL_ACTION",
52                "name": "audit_sample_missing_publication",
53                "path": "/in-vitro-systems/IGVFSM8804KQRM/"
54            }
55        ]
56    },
57    "award": {
58        "@id": "/awards/HG011986/",
59        "component": "mapping",
60        "contact_pi": {
61            "@id": "/users/33c6eb70-e143-4f77-9661-4b3905737daa/",
62            "title": "Jason Buenrostro"
63        },
64        "title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
65    },
66    "control_for": [],
67    "controlled_access": true,
68    "creation_timestamp": "2024-08-20T14:58:43.601645+00:00",
69    "data_use_limitation_summaries": [
70        "GRU"
71    ],
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77                "buenrostro-bernstein:Donor 1726"
78            ],
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81            "taxa": "Homo sapiens"
82        },
83        {
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86            "aliases": [
87                "buenrostro-bernstein:Donor 1668"
88            ],
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91            "taxa": "Homo sapiens"
92        },
93        {
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95            "accession": "IGVFDO9506VMLU",
96            "aliases": [
97                "buenrostro-bernstein:Donor 1662"
98            ],
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101            "taxa": "Homo sapiens"
102        },
103        {
104            "@id": "/human-donors/IGVFDO1593DWAA/",
105            "accession": "IGVFDO1593DWAA",
106            "aliases": [
107                "buenrostro-bernstein:Donor 1702"
108            ],
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111            "taxa": "Homo sapiens"
112        },
113        {
114            "@id": "/human-donors/IGVFDO4951MIRW/",
115            "accession": "IGVFDO4951MIRW",
116            "aliases": [
117                "buenrostro-bernstein:Donor 1723"
118            ],
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121            "taxa": "Homo sapiens"
122        },
123        {
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125            "accession": "IGVFDO1009JNIM",
126            "aliases": [
127                "buenrostro-bernstein:Donor 1714"
128            ],
129            "sex": "unspecified",
130            "status": "released",
131            "taxa": "Homo sapiens"
132        },
133        {
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135            "accession": "IGVFDO8425CFJW",
136            "aliases": [
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138            ],
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141            "taxa": "Homo sapiens"
142        },
143        {
144            "@id": "/human-donors/IGVFDO9010UZXK/",
145            "accession": "IGVFDO9010UZXK",
146            "aliases": [
147                "buenrostro-bernstein:Donor 1731"
148            ],
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151            "taxa": "Homo sapiens"
152        },
153        {
154            "@id": "/human-donors/IGVFDO8237NSQG/",
155            "accession": "IGVFDO8237NSQG",
156            "aliases": [
157                "buenrostro-bernstein:Donor 1711"
158            ],
159            "sex": "unspecified",
160            "status": "released",
161            "taxa": "Homo sapiens"
162        },
163        {
164            "@id": "/human-donors/IGVFDO7661NEKG/",
165            "accession": "IGVFDO7661NEKG",
166            "aliases": [
167                "buenrostro-bernstein:Donor 1698"
168            ],
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170            "status": "released",
171            "taxa": "Homo sapiens"
172        },
173        {
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175            "accession": "IGVFDO2216WEMV",
176            "aliases": [
177                "buenrostro-bernstein:Donor 1715"
178            ],
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181            "taxa": "Homo sapiens"
182        },
183        {
184            "@id": "/human-donors/IGVFDO6875RNLP/",
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187                "buenrostro-bernstein:Donor 1716"
188            ],
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191            "taxa": "Homo sapiens"
192        },
193        {
194            "@id": "/human-donors/IGVFDO4380OVNW/",
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196            "aliases": [
197                "buenrostro-bernstein:Donor 1713"
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200            "status": "released",
201            "taxa": "Homo sapiens"
202        },
203        {
204            "@id": "/human-donors/IGVFDO4723DYAE/",
205            "accession": "IGVFDO4723DYAE",
206            "aliases": [
207                "buenrostro-bernstein:Donor 1660"
208            ],
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211            "taxa": "Homo sapiens"
212        },
213        {
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216            "aliases": [
217                "buenrostro-bernstein:Donor 1736"
218            ],
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221            "taxa": "Homo sapiens"
222        },
223        {
224            "@id": "/human-donors/IGVFDO4461NKYB/",
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227                "buenrostro-bernstein:Donor 1727"
228            ],
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230            "status": "released",
231            "taxa": "Homo sapiens"
232        },
233        {
234            "@id": "/human-donors/IGVFDO3221BPGT/",
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236            "aliases": [
237                "buenrostro-bernstein:Donor 1730"
238            ],
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240            "status": "released",
241            "taxa": "Homo sapiens"
242        },
243        {
244            "@id": "/human-donors/IGVFDO3154SUBV/",
245            "accession": "IGVFDO3154SUBV",
246            "aliases": [
247                "buenrostro-bernstein:Donor 1746"
248            ],
249            "sex": "unspecified",
250            "status": "released",
251            "taxa": "Homo sapiens"
252        },
253        {
254            "@id": "/human-donors/IGVFDO2179KJBX/",
255            "accession": "IGVFDO2179KJBX",
256            "aliases": [
257                "buenrostro-bernstein:Donor 1710"
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260            "status": "released",
261            "taxa": "Homo sapiens"
262        },
263        {
264            "@id": "/human-donors/IGVFDO6126AWVH/",
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266            "aliases": [
267                "buenrostro-bernstein:Donor 1686"
268            ],
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271            "taxa": "Homo sapiens"
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277                "buenrostro-bernstein:Donor 1669"
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281            "taxa": "Homo sapiens"
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290            "status": "released",
291            "taxa": "Homo sapiens"
292        },
293        {
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295            "accession": "IGVFDO9555ARCU",
296            "aliases": [
297                "buenrostro-bernstein:Donor 1684"
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301            "taxa": "Homo sapiens"
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303        {
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305            "accession": "IGVFDO4062HKSZ",
306            "aliases": [
307                "buenrostro-bernstein:Donor 1695"
308            ],
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310            "status": "released",
311            "taxa": "Homo sapiens"
312        },
313        {
314            "@id": "/human-donors/IGVFDO1173NZNR/",
315            "accession": "IGVFDO1173NZNR",
316            "aliases": [
317                "buenrostro-bernstein:Donor 1725"
318            ],
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320            "status": "released",
321            "taxa": "Homo sapiens"
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323        {
324            "@id": "/human-donors/IGVFDO8502UZWR/",
325            "accession": "IGVFDO8502UZWR",
326            "aliases": [
327                "buenrostro-bernstein:Donor 1707"
328            ],
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330            "status": "released",
331            "taxa": "Homo sapiens"
332        },
333        {
334            "@id": "/human-donors/IGVFDO5062VEQA/",
335            "accession": "IGVFDO5062VEQA",
336            "aliases": [
337                "buenrostro-bernstein:Donor 1679"
338            ],
339            "sex": "unspecified",
340            "status": "released",
341            "taxa": "Homo sapiens"
342        },
343        {
344            "@id": "/human-donors/IGVFDO0508ZIBJ/",
345            "accession": "IGVFDO0508ZIBJ",
346            "aliases": [
347                "buenrostro-bernstein:Donor 1681"
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350            "status": "released",
351            "taxa": "Homo sapiens"
352        },
353        {
354            "@id": "/human-donors/IGVFDO0436YOXD/",
355            "accession": "IGVFDO0436YOXD",
356            "aliases": [
357                "buenrostro-bernstein:Donor 1745"
358            ],
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360            "status": "released",
361            "taxa": "Homo sapiens"
362        },
363        {
364            "@id": "/human-donors/IGVFDO2287CVZF/",
365            "accession": "IGVFDO2287CVZF",
366            "aliases": [
367                "buenrostro-bernstein:Donor 1708"
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370            "status": "released",
371            "taxa": "Homo sapiens"
372        },
373        {
374            "@id": "/human-donors/IGVFDO7730CFCO/",
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377                "buenrostro-bernstein:Donor 1678"
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381            "taxa": "Homo sapiens"
382        },
383        {
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397                "buenrostro-bernstein:Donor 1705"
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401            "taxa": "Homo sapiens"
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411            "taxa": "Homo sapiens"
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413        {
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430            "status": "released",
431            "taxa": "Homo sapiens"
432        },
433        {
434            "@id": "/human-donors/IGVFDO5142SUYF/",
435            "accession": "IGVFDO5142SUYF",
436            "aliases": [
437                "buenrostro-bernstein:Donor 1690"
438            ],
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440            "status": "released",
441            "taxa": "Homo sapiens"
442        },
443        {
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446            "aliases": [
447                "buenrostro-bernstein:Donor 1712"
448            ],
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450            "status": "released",
451            "taxa": "Homo sapiens"
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456            "aliases": [
457                "buenrostro-bernstein:Donor 1728"
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460            "status": "released",
461            "taxa": "Homo sapiens"
462        },
463        {
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465            "accession": "IGVFDO8776OLQD",
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468            ],
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470            "status": "released",
471            "taxa": "Homo sapiens"
472        },
473        {
474            "@id": "/human-donors/IGVFDO8623DFZV/",
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476            "aliases": [
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480            "status": "released",
481            "taxa": "Homo sapiens"
482        },
483        {
484            "@id": "/human-donors/IGVFDO7528UJWM/",
485            "accession": "IGVFDO7528UJWM",
486            "aliases": [
487                "buenrostro-bernstein:Donor 1697"
488            ],
489            "sex": "unspecified",
490            "status": "released",
491            "taxa": "Homo sapiens"
492        },
493        {
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495            "accession": "IGVFDO9752KKXF",
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498            ],
499            "sex": "unspecified",
500            "status": "released",
501            "taxa": "Homo sapiens"
502        },
503        {
504            "@id": "/human-donors/IGVFDO9672RNCH/",
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508            ],
509            "sex": "unspecified",
510            "status": "released",
511            "taxa": "Homo sapiens"
512        },
513        {
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515            "accession": "IGVFDO2149LCYH",
516            "aliases": [
517                "buenrostro-bernstein:Donor 1724"
518            ],
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520            "status": "released",
521            "taxa": "Homo sapiens"
522        },
523        {
524            "@id": "/human-donors/IGVFDO0533MSQJ/",
525            "accession": "IGVFDO0533MSQJ",
526            "aliases": [
527                "buenrostro-bernstein:Donor 1665"
528            ],
529            "sex": "unspecified",
530            "status": "released",
531            "taxa": "Homo sapiens"
532        },
533        {
534            "@id": "/human-donors/IGVFDO3402AXNZ/",
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538            ],
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541            "taxa": "Homo sapiens"
542        },
543        {
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548            ],
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551            "taxa": "Homo sapiens"
552        },
553        {
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560            "status": "released",
561            "taxa": "Homo sapiens"
562        },
563        {
564            "@id": "/human-donors/IGVFDO6890GTBA/",
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566            "aliases": [
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568            ],
569            "sex": "unspecified",
570            "status": "released",
571            "taxa": "Homo sapiens"
572        },
573        {
574            "@id": "/human-donors/IGVFDO5885PQJM/",
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576            "aliases": [
577                "buenrostro-bernstein:Donor 1658"
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580            "status": "released",
581            "taxa": "Homo sapiens"
582        },
583        {
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590            "status": "released",
591            "taxa": "Homo sapiens"
592        },
593        {
594            "@id": "/human-donors/IGVFDO3469EFJR/",
595            "accession": "IGVFDO3469EFJR",
596            "aliases": [
597                "buenrostro-bernstein:Donor 1741"
598            ],
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600            "status": "released",
601            "taxa": "Homo sapiens"
602        },
603        {
604            "@id": "/human-donors/IGVFDO3222ZPKA/",
605            "accession": "IGVFDO3222ZPKA",
606            "aliases": [
607                "buenrostro-bernstein:Donor 1732"
608            ],
609            "sex": "unspecified",
610            "status": "released",
611            "taxa": "Homo sapiens"
612        },
613        {
614            "@id": "/human-donors/IGVFDO8300LREN/",
615            "accession": "IGVFDO8300LREN",
616            "aliases": [
617                "buenrostro-bernstein:Donor 1670"
618            ],
619            "sex": "unspecified",
620            "status": "released",
621            "taxa": "Homo sapiens"
622        },
623        {
624            "@id": "/human-donors/IGVFDO7165KOCS/",
625            "accession": "IGVFDO7165KOCS",
626            "aliases": [
627                "buenrostro-bernstein:Donor 1683"
628            ],
629            "sex": "unspecified",
630            "status": "released",
631            "taxa": "Homo sapiens"
632        },
633        {
634            "@id": "/human-donors/IGVFDO5035RSOM/",
635            "accession": "IGVFDO5035RSOM",
636            "aliases": [
637                "buenrostro-bernstein:Donor 1733"
638            ],
639            "sex": "unspecified",
640            "status": "released",
641            "taxa": "Homo sapiens"
642        },
643        {
644            "@id": "/human-donors/IGVFDO4534QGFO/",
645            "accession": "IGVFDO4534QGFO",
646            "aliases": [
647                "buenrostro-bernstein:Donor 1691"
648            ],
649            "sex": "unspecified",
650            "status": "released",
651            "taxa": "Homo sapiens"
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1502                        "OntologyTerm",
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1524        "title": "Siddarth Wekhande"
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1529}