{
"@context": "/terms/",
"@id": "/measurement-sets/IGVFDS4817OHKN/",
"@type": [
"MeasurementSet",
"FileSet",
"Item"
],
"accession": "IGVFDS4817OHKN",
"aliases": [
"igvf:corces_measurementSet_RP001_G8_RNA"
],
"assay_term": {
"@id": "/assay-terms/OBI_0003109/",
"assay_slims": [
"gene expression"
],
"status": "released",
"term_name": "single-nucleus RNA sequencing assay"
},
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [416ac19b-be8b-4230-b781-ac2ad4d72ca0](/phenotypic-features/416ac19b-be8b-4230-b781-ac2ad4d72ca0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [d5720da2-f518-4f62-ab22-531e43e00201](/phenotypic-features/d5720da2-f518-4f62-ab22-531e43e00201/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [ab7e4cfe-ea26-4525-ab85-dd11e60815e3](/phenotypic-features/ab7e4cfe-ea26-4525-ab85-dd11e60815e3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO9028PIDF](/human-donors/IGVFDO9028PIDF/) has in progress subobject phenotypic feature [101b5ed8-c92e-433b-a591-b7bef11037b5](/phenotypic-features/101b5ed8-c92e-433b-a591-b7bef11037b5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO9028PIDF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [d033da7a-d05d-493a-b14b-e92da476513e](/phenotypic-features/d033da7a-d05d-493a-b14b-e92da476513e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [c0600e19-9e31-48ca-8137-d2ebb5c3020f](/phenotypic-features/c0600e19-9e31-48ca-8137-d2ebb5c3020f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [223f8656-33f6-4df2-a0ef-f2d3acc4b93f](/phenotypic-features/223f8656-33f6-4df2-a0ef-f2d3acc4b93f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [1967f945-b778-40e9-b9ee-268d7dd12697](/phenotypic-features/1967f945-b778-40e9-b9ee-268d7dd12697/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [20ecf55a-d575-4751-9a64-bf523a4d2f6a](/phenotypic-features/20ecf55a-d575-4751-9a64-bf523a4d2f6a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO8817BLIU](/human-donors/IGVFDO8817BLIU/) has in progress subobject phenotypic feature [6a9ef7bb-d019-40c0-9bec-d9729b35bdbd](/phenotypic-features/6a9ef7bb-d019-40c0-9bec-d9729b35bdbd/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO8817BLIU/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [93b9663b-8d12-4847-b578-798d6d08a5d7](/phenotypic-features/93b9663b-8d12-4847-b578-798d6d08a5d7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [b108288d-1ef0-4234-9b6b-10c5011f2d3e](/phenotypic-features/b108288d-1ef0-4234-9b6b-10c5011f2d3e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [8790c6f7-88f2-4fb1-ac9c-edba4df8ee68](/phenotypic-features/8790c6f7-88f2-4fb1-ac9c-edba4df8ee68/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [5cb28322-2d6b-409f-950e-f6b78c71b3c5](/phenotypic-features/5cb28322-2d6b-409f-950e-f6b78c71b3c5/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6380POHE](/human-donors/IGVFDO6380POHE/) has in progress subobject phenotypic feature [74a7866d-ae30-4c3c-87c8-e6ee465cbb92](/phenotypic-features/74a7866d-ae30-4c3c-87c8-e6ee465cbb92/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6380POHE/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [c1af321e-187f-465d-82c2-7f3167821d82](/phenotypic-features/c1af321e-187f-465d-82c2-7f3167821d82/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [5bbb08a5-85e9-4c47-b3a0-47e8c124020a](/phenotypic-features/5bbb08a5-85e9-4c47-b3a0-47e8c124020a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [d8974890-5de1-43a0-bbdd-662642652835](/phenotypic-features/d8974890-5de1-43a0-bbdd-662642652835/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [3e9cf626-9ed1-49cb-a08d-99e7e9d01e03](/phenotypic-features/3e9cf626-9ed1-49cb-a08d-99e7e9d01e03/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [f47cb079-e39d-44ed-aa9b-ae76dd89e912](/phenotypic-features/f47cb079-e39d-44ed-aa9b-ae76dd89e912/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0112XZXT](/human-donors/IGVFDO0112XZXT/) has in progress subobject phenotypic feature [f3293daa-5b2a-482d-b783-e74292e01215](/phenotypic-features/f3293daa-5b2a-482d-b783-e74292e01215/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0112XZXT/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [720bd45c-2c73-4875-a5b5-e72cc71bb6d0](/phenotypic-features/720bd45c-2c73-4875-a5b5-e72cc71bb6d0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [ecd9afa5-b266-4da4-87d2-368b418027c9](/phenotypic-features/ecd9afa5-b266-4da4-87d2-368b418027c9/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [5893460c-131f-4b98-acd5-26997171dd9a](/phenotypic-features/5893460c-131f-4b98-acd5-26997171dd9a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [26dc3c60-2374-4916-ab7b-9f5bcb4ac64f](/phenotypic-features/26dc3c60-2374-4916-ab7b-9f5bcb4ac64f/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4191KJBR](/human-donors/IGVFDO4191KJBR/) has in progress subobject phenotypic feature [12a9cbe8-866d-423e-b734-d6d39b31fb34](/phenotypic-features/12a9cbe8-866d-423e-b734-d6d39b31fb34/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4191KJBR/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [36d319d6-1788-48ea-a5f8-3153454ccab7](/phenotypic-features/36d319d6-1788-48ea-a5f8-3153454ccab7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1302YEPX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [29eaabd2-1a32-481b-a752-2735f7051661](/phenotypic-features/29eaabd2-1a32-481b-a752-2735f7051661/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1302YEPX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [957cdcbe-cef4-45fe-94f2-d2bb63ed5e05](/phenotypic-features/957cdcbe-cef4-45fe-94f2-d2bb63ed5e05/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1302YEPX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [83351a5f-d758-46ad-b40e-64f2557e39e8](/phenotypic-features/83351a5f-d758-46ad-b40e-64f2557e39e8/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1302YEPX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1302YEPX](/human-donors/IGVFDO1302YEPX/) has in progress subobject phenotypic feature [f5b4fdb4-cb5d-403a-9c5c-6208c6a3624e](/phenotypic-features/f5b4fdb4-cb5d-403a-9c5c-6208c6a3624e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1302YEPX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [08a4bc6e-1d5d-46df-92f0-6085a35a75a7](/phenotypic-features/08a4bc6e-1d5d-46df-92f0-6085a35a75a7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [b2b44f93-e621-43f7-80a5-3d1b73a794b2](/phenotypic-features/b2b44f93-e621-43f7-80a5-3d1b73a794b2/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [e60abb08-e197-449b-8eb8-7172db9d3bac](/phenotypic-features/e60abb08-e197-449b-8eb8-7172db9d3bac/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [8442786a-d708-482c-8764-201d14e47680](/phenotypic-features/8442786a-d708-482c-8764-201d14e47680/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6513APBX](/human-donors/IGVFDO6513APBX/) has in progress subobject phenotypic feature [68fe3a71-6fc0-47e8-834c-794714585a7e](/phenotypic-features/68fe3a71-6fc0-47e8-834c-794714585a7e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6513APBX/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [b56bf52d-97da-4084-bf29-fe5ddcbca885](/phenotypic-features/b56bf52d-97da-4084-bf29-fe5ddcbca885/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [36f110b3-ce3c-4adb-acea-eaf2033ddc62](/phenotypic-features/36f110b3-ce3c-4adb-acea-eaf2033ddc62/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [d3b01418-90c3-49c1-a68a-c78b0c579754](/phenotypic-features/d3b01418-90c3-49c1-a68a-c78b0c579754/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [f6f8a961-ff33-42a3-89a3-44c3f09fe474](/phenotypic-features/f6f8a961-ff33-42a3-89a3-44c3f09fe474/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [f12ecc3c-67f0-4fce-8b6e-de7acb654b51](/phenotypic-features/f12ecc3c-67f0-4fce-8b6e-de7acb654b51/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6316TGCK](/human-donors/IGVFDO6316TGCK/) has in progress subobject phenotypic feature [ede77913-c99e-4e14-90ec-baf07e24b231](/phenotypic-features/ede77913-c99e-4e14-90ec-baf07e24b231/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6316TGCK/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c2483f59-ee42-47e9-855b-4121902f7e6e](/phenotypic-features/c2483f59-ee42-47e9-855b-4121902f7e6e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [bd6f3062-edeb-4a6b-8894-efd13d5f6d1a](/phenotypic-features/bd6f3062-edeb-4a6b-8894-efd13d5f6d1a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [c474daa4-7513-404e-94d5-875f37a7c343](/phenotypic-features/c474daa4-7513-404e-94d5-875f37a7c343/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [a0d65347-a21f-439b-bd5d-7232f0b1ee5e](/phenotypic-features/a0d65347-a21f-439b-bd5d-7232f0b1ee5e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [688afed8-9edc-4232-aad4-2342093c1c09](/phenotypic-features/688afed8-9edc-4232-aad4-2342093c1c09/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO4825ZGIS](/human-donors/IGVFDO4825ZGIS/) has in progress subobject phenotypic feature [088a9bc3-3c47-43fb-a433-e98b083f05b0](/phenotypic-features/088a9bc3-3c47-43fb-a433-e98b083f05b0/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO4825ZGIS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [457ba560-b6d1-4bea-b7fa-c043ca79ab7b](/phenotypic-features/457ba560-b6d1-4bea-b7fa-c043ca79ab7b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [f002bd57-9c69-46f5-baeb-02ef36f0ae95](/phenotypic-features/f002bd57-9c69-46f5-baeb-02ef36f0ae95/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [99530794-7cba-40b4-a9d0-816f682a6751](/phenotypic-features/99530794-7cba-40b4-a9d0-816f682a6751/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [e469ed8e-b7b3-43ab-911f-20f855038419](/phenotypic-features/e469ed8e-b7b3-43ab-911f-20f855038419/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [fff30f45-9273-47a0-847f-0619e27db9f1](/phenotypic-features/fff30f45-9273-47a0-847f-0619e27db9f1/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO0411QFOF](/human-donors/IGVFDO0411QFOF/) has in progress subobject phenotypic feature [b9914545-281c-4c85-add2-46440dec3556](/phenotypic-features/b9914545-281c-4c85-add2-46440dec3556/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO0411QFOF/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [66e32efb-7f85-4402-a04c-fece8128ee8e](/phenotypic-features/66e32efb-7f85-4402-a04c-fece8128ee8e/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [42c6269c-25ee-4326-b51c-086f9665bf75](/phenotypic-features/42c6269c-25ee-4326-b51c-086f9665bf75/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [5ec82856-d387-4727-9473-c60628ddce27](/phenotypic-features/5ec82856-d387-4727-9473-c60628ddce27/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [0cd59ebe-1db1-4f78-94b0-874fcf8fe239](/phenotypic-features/0cd59ebe-1db1-4f78-94b0-874fcf8fe239/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [a945aea6-1bca-4a51-a030-e44b27e81d2a](/phenotypic-features/a945aea6-1bca-4a51-a030-e44b27e81d2a/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO1469WVVS](/human-donors/IGVFDO1469WVVS/) has in progress subobject phenotypic feature [fd6110d1-a29e-4225-a5e6-27a7614bcdd7](/phenotypic-features/fd6110d1-a29e-4225-a5e6-27a7614bcdd7/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO1469WVVS/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [a331f60c-ad57-4e67-abef-71ce7f5c533b](/phenotypic-features/a331f60c-ad57-4e67-abef-71ce7f5c533b/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [5aff39eb-64aa-4ab2-b6ac-9352e4e5974d](/phenotypic-features/5aff39eb-64aa-4ab2-b6ac-9352e4e5974d/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [e5d45886-2d5a-4f54-9595-ddecf9ee0dc3](/phenotypic-features/e5d45886-2d5a-4f54-9595-ddecf9ee0dc3/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8a8a3203-c182-4206-8786-d22c604017ca](/phenotypic-features/8a8a3203-c182-4206-8786-d22c604017ca/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
},
{
"category": "mismatched status",
"detail": "Preview human donor [IGVFDO6000JDZW](/human-donors/IGVFDO6000JDZW/) has in progress subobject phenotypic feature [8d33ce55-7875-4008-8ea0-117b359f3bde](/phenotypic-features/8d33ce55-7875-4008-8ea0-117b359f3bde/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/human-donors/IGVFDO6000JDZW/"
}
],
"NOT_COMPLIANT": [
{
"category": "missing sequence specification",
"detail": "Measurement set [IGVFDS4817OHKN](/measurement-sets/IGVFDS4817OHKN/) has sequence file(s): [IGVFFI1406TIKT](/sequence-files/IGVFFI1406TIKT/), [IGVFFI7284DLKH](/sequence-files/IGVFFI7284DLKH/), [IGVFFI7435YJXN](/sequence-files/IGVFFI7435YJXN/), [IGVFFI9536KLGN](/sequence-files/IGVFFI9536KLGN/), [IGVFFI4805TNGV](/sequence-files/IGVFFI4805TNGV/), [IGVFFI4449JIKL](/sequence-files/IGVFFI4449JIKL/), [IGVFFI8612ZHXV](/sequence-files/IGVFFI8612ZHXV/), [IGVFFI4889HVZN](/sequence-files/IGVFFI4889HVZN/), [IGVFFI4929UCQU](/sequence-files/IGVFFI4929UCQU/), [IGVFFI5437NNDA](/sequence-files/IGVFFI5437NNDA/), [IGVFFI0699LVOQ](/sequence-files/IGVFFI0699LVOQ/), [IGVFFI4646YPLK](/sequence-files/IGVFFI4646YPLK/), [IGVFFI3388SILJ](/sequence-files/IGVFFI3388SILJ/), [IGVFFI6601PPMA](/sequence-files/IGVFFI6601PPMA/), [IGVFFI8919OCCY](/sequence-files/IGVFFI8919OCCY/), [IGVFFI7380PGSI](/sequence-files/IGVFFI7380PGSI/) which do not have any `seqspecs`. Sequence files in a file set associated with single cell data are expected to link to a sequence specification file.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_seqspec",
"path": "/measurement-sets/IGVFDS4817OHKN/"
},
{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS4817OHKN](/measurement-sets/IGVFDS4817OHKN/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS4817OHKN/"
}
],
"WARNING": [
{
"category": "missing analysis",
"detail": "Measurement set [IGVFDS4817OHKN](/measurement-sets/IGVFDS4817OHKN/) is a raw data set with files, but is not listed in any `input_file_sets` for any analysis sets. Raw data sets with files are expected to be associated with at least one analysis set.",
"level": 40,
"level_name": "WARNING",
"name": "audit_input_for",
"path": "/measurement-sets/IGVFDS4817OHKN/"
}
]
},
"award": {
"@id": "/awards/HG012076/",
"component": "mapping",
"contact_pi": {
"@id": "/users/eae4c275-1e07-45e4-ae67-3e437a8680bb/",
"title": "Ansuman Satpathy"
},
"title": "Single-cell Mapping Center for Human Regulatory Elements and Gene Activity"
},
"control_for": [],
"controlled_access": false,
"creation_timestamp": "2025-03-19T21:40:05.391368+00:00",
"data_use_limitation_summaries": [
"No limitations"
],
"donors": [
{
"@id": "/human-donors/IGVFDO6513APBX/",
"accession": "IGVFDO6513APBX",
"aliases": [
"igvf:corces_donor_BANN0210"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO9028PIDF/",
"accession": "IGVFDO9028PIDF",
"aliases": [
"igvf:corces_donor_BANN1637"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0112XZXT/",
"accession": "IGVFDO0112XZXT",
"aliases": [
"igvf:corces_donor_BANN0218"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6316TGCK/",
"accession": "IGVFDO6316TGCK",
"aliases": [
"igvf:corces_donor_BANN1814"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4825ZGIS/",
"accession": "IGVFDO4825ZGIS",
"aliases": [
"igvf:corces_donor_BANN2057"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO0411QFOF/",
"accession": "IGVFDO0411QFOF",
"aliases": [
"igvf:corces_donor_BANN1750"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1469WVVS/",
"accession": "IGVFDO1469WVVS",
"aliases": [
"igvf:corces_donor_BANN1063"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO8817BLIU/",
"accession": "IGVFDO8817BLIU",
"aliases": [
"igvf:corces_donor_BANN1039"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO4191KJBR/",
"accession": "IGVFDO4191KJBR",
"aliases": [
"igvf:corces_donor_BANN0129"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO1302YEPX/",
"accession": "IGVFDO1302YEPX",
"aliases": [
"igvf:corces_donor_BANN0215"
],
"sex": "female",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6380POHE/",
"accession": "IGVFDO6380POHE",
"aliases": [
"igvf:corces_donor_BANN0124"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO6000JDZW/",
"accession": "IGVFDO6000JDZW",
"aliases": [
"igvf:corces_donor_BANN1858"
],
"sex": "male",
"status": "preview",
"taxa": "Homo sapiens"
}
],
"externally_hosted": false,
"file_set_type": "experimental data",
"files": [
{
"@id": "/sequence-files/IGVFFI1406TIKT/",
"accession": "IGVFFI1406TIKT",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L001_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:05.624743+00:00",
"file_format": "fastq",
"file_size": 1395467721,
"href": "/sequence-files/IGVFFI1406TIKT/@@download/IGVFFI1406TIKT.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/8ee30bc9-75a4-457a-b445-6bbe72fa2de7/IGVFFI1406TIKT.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L001_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7284DLKH/",
"accession": "IGVFFI7284DLKH",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L002_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:10.792002+00:00",
"file_format": "fastq",
"file_size": 217848373,
"href": "/sequence-files/IGVFFI7284DLKH/@@download/IGVFFI7284DLKH.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/0ccd8e5b-40f3-4c39-884e-5282fd455f29/IGVFFI7284DLKH.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L002_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7435YJXN/",
"accession": "IGVFFI7435YJXN",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L002_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:14.301498+00:00",
"file_format": "fastq",
"file_size": 676406398,
"href": "/sequence-files/IGVFFI7435YJXN/@@download/IGVFFI7435YJXN.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/5c6928b1-5eaa-4a15-8c37-07bf20f9949a/IGVFFI7435YJXN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L002_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI9536KLGN/",
"accession": "IGVFFI9536KLGN",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L003_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:24.488160+00:00",
"file_format": "fastq",
"file_size": 228678063,
"href": "/sequence-files/IGVFFI9536KLGN/@@download/IGVFFI9536KLGN.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/8594b0a4-1430-4166-838d-df3102b4b1ea/IGVFFI9536KLGN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L003_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4805TNGV/",
"accession": "IGVFFI4805TNGV",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L004_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:37.393804+00:00",
"file_format": "fastq",
"file_size": 228508294,
"href": "/sequence-files/IGVFFI4805TNGV/@@download/IGVFFI4805TNGV.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/6bd03100-37d6-4362-bf25-d2f035cc70cb/IGVFFI4805TNGV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L004_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4449JIKL/",
"accession": "IGVFFI4449JIKL",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L004_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:43.992556+00:00",
"file_format": "fastq",
"file_size": 1578366598,
"href": "/sequence-files/IGVFFI4449JIKL/@@download/IGVFFI4449JIKL.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/3de78583-12d9-47e5-a5c9-ffeeb6f442f9/IGVFFI4449JIKL.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L004_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8612ZHXV/",
"accession": "IGVFFI8612ZHXV",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L003_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:31.072994+00:00",
"file_format": "fastq",
"file_size": 1569934193,
"href": "/sequence-files/IGVFFI8612ZHXV/@@download/IGVFFI8612ZHXV.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/e46f7edf-11ca-4d55-9e3c-5c51739f7747/IGVFFI8612ZHXV.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L003_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4889HVZN/",
"accession": "IGVFFI4889HVZN",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L004_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:34.220242+00:00",
"file_format": "fastq",
"file_size": 233298146,
"href": "/sequence-files/IGVFFI4889HVZN/@@download/IGVFFI4889HVZN.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/153bdf7d-8694-4e7f-a7cd-a671017f4b72/IGVFFI4889HVZN.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L004_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4929UCQU/",
"accession": "IGVFFI4929UCQU",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L004_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:40.837318+00:00",
"file_format": "fastq",
"file_size": 738911665,
"href": "/sequence-files/IGVFFI4929UCQU/@@download/IGVFFI4929UCQU.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b0b7dd8a-f230-4e7b-b3ab-45829711373b/IGVFFI4929UCQU.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L004_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI5437NNDA/",
"accession": "IGVFFI5437NNDA",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L003_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:28.186373+00:00",
"file_format": "fastq",
"file_size": 735777894,
"href": "/sequence-files/IGVFFI5437NNDA/@@download/IGVFFI5437NNDA.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/238aa95d-bccb-4138-8b7a-930196702ec0/IGVFFI5437NNDA.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L003_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI0699LVOQ/",
"accession": "IGVFFI0699LVOQ",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L002_R2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:18.457278+00:00",
"file_format": "fastq",
"file_size": 1444503628,
"href": "/sequence-files/IGVFFI0699LVOQ/@@download/IGVFFI0699LVOQ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/e734dc92-97a1-49eb-af00-100ae1c92980/IGVFFI0699LVOQ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L002_R2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI4646YPLK/",
"accession": "IGVFFI4646YPLK",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L001_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:51:55.288124+00:00",
"file_format": "fastq",
"file_size": 212880657,
"href": "/sequence-files/IGVFFI4646YPLK/@@download/IGVFFI4646YPLK.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/b1b88336-e6a2-41b5-a628-6d9f7a804ffe/IGVFFI4646YPLK.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L001_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI3388SILJ/",
"accession": "IGVFFI3388SILJ",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L001_I2"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:51:58.134803+00:00",
"file_format": "fastq",
"file_size": 206809736,
"href": "/sequence-files/IGVFFI3388SILJ/@@download/IGVFFI3388SILJ.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/3b799f8e-ed29-483b-b384-4318094ff41c/IGVFFI3388SILJ.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L001_I2_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI6601PPMA/",
"accession": "IGVFFI6601PPMA",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L001_R1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:00.857025+00:00",
"file_format": "fastq",
"file_size": 652135749,
"href": "/sequence-files/IGVFFI6601PPMA/@@download/IGVFFI6601PPMA.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/57a92f21-5151-42c8-a96f-8283cfef1815/IGVFFI6601PPMA.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L001_R1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI8919OCCY/",
"accession": "IGVFFI8919OCCY",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L002_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:07.945128+00:00",
"file_format": "fastq",
"file_size": 223890032,
"href": "/sequence-files/IGVFFI8919OCCY/@@download/IGVFFI8919OCCY.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/80a7795e-3620-4a1b-9ca0-8bafc91bedf1/IGVFFI8919OCCY.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L002_I1_001.fastq.gz",
"upload_status": "validated"
},
{
"@id": "/sequence-files/IGVFFI7380PGSI/",
"accession": "IGVFFI7380PGSI",
"aliases": [
"igvf:corces_sequenceFile_RNA_RP001_G8_P052_L003_I1"
],
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2025-03-20T14:52:21.472495+00:00",
"file_format": "fastq",
"file_size": 234495925,
"href": "/sequence-files/IGVFFI7380PGSI/@@download/IGVFFI7380PGSI.fastq.gz",
"s3_uri": "s3://igvf-files/2025/03/20/54fc66ab-558a-4557-b711-b4aa81af4a75/IGVFFI7380PGSI.fastq.gz",
"sequencing_platform": {
"@id": "/platform-terms/EFO_0022840/",
"status": "released",
"term_name": "Illumina NovaSeq X"
},
"status": "preview",
"submitted_file_name": "Multiome_RNA_RP001_G8_L008_P052_S8_L003_I1_001.fastq.gz",
"upload_status": "validated"
}
],
"input_for": [],
"lab": {
"@id": "/labs/ryan-corces/",
"title": "Ryan Corces, Gladstone Institute UCSF"
},
"multiome_size": 2,
"onlist_files": [
"/tabular-files/IGVFFI8751YQRY/"
],
"onlist_method": "no combination",
"preferred_assay_title": "10x multiome",
"protocols": [
"https://www.protocols.io/view/chromium-next-gem-single-cell-multiome-atac-gene-e-d5k784zn"
],
"related_multiome_datasets": [
{
"@id": "/measurement-sets/IGVFDS6751EKJB/",
"accession": "IGVFDS6751EKJB",
"status": "preview"
}
],
"samples": [
{
"@id": "/multiplexed-samples/IGVFSM4595ROAA/",
"@type": [
"MultiplexedSample",
"Sample",
"Item"
],
"accession": "IGVFSM4595ROAA",
"aliases": [
"igvf:corces_multiplexedSample_RP001_G8"
],
"classifications": [
"tissue",
"multiplexed sample"
],
"disease_terms": [
{
"@id": "/phenotype-terms/DOID_0080832/",
"status": "in progress",
"term_name": "mild cognitive impairment"
},
{
"@id": "/phenotype-terms/DOID_14330/",
"status": "in progress",
"term_name": "Parkinson's disease"
},
{
"@id": "/phenotype-terms/DOID_9246/",
"status": "in progress",
"term_name": "cerebral amyloid angiopathy"
},
{
"@id": "/phenotype-terms/MONDO_0004975/",
"status": "released",
"term_name": "Alzheimer disease"
}
],
"institutional_certificates": [
{
"@id": "/institutional-certificates/f7742e0d-bba4-4ca3-ab80-71c7364f24e7/",
"certificate_identifier": "IP115-05",
"controlled_access": false,
"status": "in progress"
}
],
"modifications": [],
"sample_terms": [
{
"@id": "/sample-terms/UBERON_0001874/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "putamen",
"term_name": "putamen"
},
{
"@id": "/sample-terms/UBERON_0002038/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "substantia nigra",
"term_name": "substantia nigra"
},
{
"@id": "/sample-terms/UBERON_0002129/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "cerebellar cortex",
"term_name": "cerebellar cortex"
},
{
"@id": "/sample-terms/UBERON_0002740/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "posterior cingulate gyrus",
"term_name": "posterior cingulate gyrus"
},
{
"@id": "/sample-terms/UBERON_0002771/",
"@type": [
"SampleTerm",
"OntologyTerm",
"Item"
],
"status": "preview",
"summary": "middle temporal gyrus",
"term_name": "middle temporal gyrus"
}
],
"status": "preview",
"summary": "multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples",
"taxa": "Homo sapiens",
"treatments": []
}
],
"schema_version": "26",
"status": "preview",
"submitted_by": {
"@id": "/users/c13db3ca-f844-4a69-9056-5fbc4a100f36/",
"title": "Ryan Corces"
},
"submitted_files_timestamp": "2025-03-20T14:51:55.288124+00:00",
"summary": "single-nucleus RNA sequencing assay (10x multiome)",
"uuid": "872a1620-f4b6-4f0e-a9fc-e6753d9a7f23"
}