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IGVFDS4624JCMI

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 576)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 1691
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

4 items
Read Names
fastq
reads
R1
8316
Read 1
22TMH5LT3
3.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8316
Read 2, Barcode index
22TMH5LT3
5.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8348
Read 1
22V3MJLT3
1.3 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8348
Read 2, Barcode index
22V3MJLT3
1.9 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
Tissue
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 576)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • ali-mortazavi:770_CASTJ_10F
  • buenrostro-bernstein:Donor 2072
female
Mus musculus

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 811
Jason Buenrostro, Broad