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INDEXED
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MeasurementSet
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IGVFDS4538IFHF
IGVFDS4538IFHF
released
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Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 14 days
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C38_day14
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI0566HIUD
fastq
reads
R2
2
Illumina NovaSeq X
8
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI0574KYCM
fastq
reads
R1
1
Illumina NovaSeq X
5
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI0709KCGI
fastq
reads
R1
1
Illumina NovaSeq X
8
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI1356ZWDH
fastq
reads
R2
2
Illumina NovaSeq X
1
2.6 GB
Chongyuan Luo, UCLA
validated
IGVFFI1763XXUT
fastq
reads
R1
1
Illumina NovaSeq X
6
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI1825BLUM
fastq
reads
R1
1
Illumina NovaSeq X
3
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI2011JDFB
fastq
reads
R1
1
Illumina NovaSeq X
4
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI2089JXSQ
fastq
reads
R2
2
Illumina NovaSeq X
7
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI2314ZANQ
fastq
reads
R2
2
Illumina NovaSeq X
3
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI2975BARF
fastq
reads
R2
2
Illumina NovaSeq X
4
2.8 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM6703IVGD
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 14 days
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO2328XGNY
chongyuan-luo:C38
unspecified
Homo sapiens