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IGVFDS4496CBBT

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 21
buenrostro-bernstein:scATAC Lib 21

Sequencing Results (Illumina)

16 items
fastq
reads
R2
1607
1.5 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2565
352 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2373
603 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1415
1.4 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1703
828 B
Jason Buenrostro, Broad
validated
fastq
reads
R2
2277
600 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2469
354 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1415
2.4 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1607
900 B
Jason Buenrostro, Broad
validated
fastq
reads
R1
1511
754 B
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1509
  • buenrostro-bernstein:Donor 1509
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 21
  • buenrostro-bernstein:scRNA Lib 21
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad