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IGVFDS4446SEFX

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 179)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 438
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

36 items
Read Names
fastq
reads
R2
8562
Read 2
22LMVNLT4
798 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
9138
Read 1
22LMVNLT4
780 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8562
Barcode index
22LMVNLT4
485 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
8850
Read 1
22LMVNLT4
834 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
932
Barcode index
22773CLT3
459 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8850
Read 2
22LMVNLT4
804 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
974
Read 2
22773CLT3
513 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
9138
Barcode index
22LMVNLT4
461 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
8754
Read 2
22LMVNLT4
797 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
8850
Barcode index
22LMVNLT4
486 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 179)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • buenrostro-bernstein:scRNA Lib 429
Jason Buenrostro, Broad