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INDEXED
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MeasurementSet
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IGVFDS4418VLDF
IGVFDS4418VLDF
released
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Json view
File Set Type
experimental data
Summary
snM3C-seq
Assay Term
single nucleus methylation and chromatin conformation capture sequencing
Sample Summaries
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day
Protocols
https://www.protocols.io/view/snm3c-seq3-kqdg3x6ezg25/v1
Aliases
chongyuan-luo:pgp_snm3c_C39_day1
Attribution
Chongyuan Luo, UCLA
(
HG012079
—
Chongyuan Luo
)
Sequencing Results (Illumina)
16 items
1
2
Accession
File Format
Content Type
Illumina Read Type
Sequencing Run
Read Names
Associated seqspec Files
Sequence Specification Document
Sequencing Platform
Flowcell ID
Lane
Index
File Size
Lab
Upload Status
IGVFFI3190RDKP
fastq
reads
R1
1
Illumina NovaSeq X
6
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI3515XSAX
fastq
reads
R2
1
Illumina NovaSeq X
8
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI3837GWXG
fastq
reads
R1
1
Illumina NovaSeq X
2
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI4249ZULU
fastq
reads
R2
1
Illumina NovaSeq X
7
2.9 GB
Chongyuan Luo, UCLA
validated
IGVFFI4309AZNI
fastq
reads
R2
1
Illumina NovaSeq X
1
2.7 GB
Chongyuan Luo, UCLA
validated
IGVFFI4777MCFF
fastq
reads
R2
1
Illumina NovaSeq X
4
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI5444MOBM
fastq
reads
R2
1
Illumina NovaSeq X
2
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI5733RAUU
fastq
reads
R1
1
Illumina NovaSeq X
4
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI6781SJOX
fastq
reads
R1
1
Illumina NovaSeq X
7
2.8 GB
Chongyuan Luo, UCLA
validated
IGVFFI7069EDYF
fastq
reads
R2
1
Illumina NovaSeq X
5
2.9 GB
Chongyuan Luo, UCLA
validated
Samples
1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
IGVFSM0523BGBM
InVitroSystem
fibroblast
Homo sapiens fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO4068JJIT
chongyuan-luo:C39
unspecified
Homo sapiens