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IGVFDS4294VHJD

released
GRU
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 163)
Protocols
Aliases
buenrostro-bernstein:scATAC Lib 343
Submitter Comment
Does not have corresponding scRNA seq MeasurementSet due to failed QC
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

3 items
Read Names
fastq
reads
I1
4412
Barcode index
22JMFMLT3
2.6 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
4412
Read 1
22JMFMLT3
4.7 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
4412
Read 2
22JMFMLT3
4.5 GB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 163)

Donors

89 items
Aliases
  • buenrostro-bernstein:Donor 1719
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1735
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1681
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1665
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1663
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1661
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1675
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1694
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1668
unspecified
Homo sapiens