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IGVFDS4251DXEC

released
GRU
File Set Type
experimental data
Summary
single-cell RNA sequencing assay (SHARE-seq)
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 181)
Protocols
Aliases
buenrostro-bernstein:scRNA Lib 436
Attribution
Jason Buenrostro, Broad

Sequencing Results (Illumina)

6 items
Read Names
fastq
reads
R1
855
Read 1
22773CLT3
1.4 GB
Jason Buenrostro, Broad
validated
fastq
reads
R1
897
Read 1
22773CLT3
1.2 GB
Jason Buenrostro, Broad
validated
fastq
reads
R2
855
Read 2
22773CLT3
678 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
897
Barcode index
22773CLT3
433 MB
Jason Buenrostro, Broad
validated
fastq
reads
I1
855
Barcode index
22773CLT3
492 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
897
Read 2
22773CLT3
580 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Associated Construct Library Sets
Summary
InVitroSystem
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 181)

Donors

100 items
Aliases
  • buenrostro-bernstein:Donor 1860
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1850
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1816
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1862
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1834
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1876
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1828
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1892
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1745
unspecified
Homo sapiens
  • buenrostro-bernstein:Donor 1867
unspecified
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell ATAC-seq (SHARE-seq)
  • buenrostro-bernstein:scATAC Lib 451
Jason Buenrostro, Broad