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IGVFDS4220YBNS

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This object is in preview status. Metadata is subject to change until this object is released.
File Set Type
experimental data
Summary
single-nucleus RNA sequencing assay (10x multiome)
Assay Term
single-nucleus RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples
Protocols
Aliases
igvf:corces_measurementSet_RP006_G1_RNA
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Results (Illumina)

16 items
Read Names
fastq
reads
R1
2
Read 1
225LGWLT3
3
1.2 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
2
225LGWLT3
3
350 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R1
1
Read 1
223JHVLT3
7
1.1 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R2
2
Read 2
225LGWLT3
4
2.6 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
1
223JHVLT3
7
330 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R1
1
Read 1
223JHVLT3
8
1.1 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I1
2
225LGWLT3
3
335 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I2
2
225LGWLT3
4
361 MB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
R2
2
Read 2
225LGWLT3
3
2.6 GB
Ryan Corces, Gladstone Institute UCSF
validated
fastq
reads
I1
1
223JHVLT3
8
300 MB
Ryan Corces, Gladstone Institute UCSF
validated

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Associated Construct Library Sets
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 80 years) middle temporal gyrus tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (male, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples

Donors

12 items
Aliases
  • igvf:corces_donor_BANN1750
male
Homo sapiens
  • igvf:corces_donor_BANN0138
female
Homo sapiens
  • igvf:corces_donor_BANN1506
male
Homo sapiens
  • igvf:corces_donor_BANN0129
male
Homo sapiens
  • igvf:corces_donor_BANN9926
female
Homo sapiens
  • igvf:corces_donor_BANN1329
male
Homo sapiens
  • igvf:corces_donor_BANN0210
male
Homo sapiens
  • igvf:corces_donor_BANN1234
male
Homo sapiens
  • igvf:corces_donor_BANN1349
female
Homo sapiens
  • igvf:corces_donor_BANN0341
male
Homo sapiens

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-nucleus ATAC-seq (10x multiome)
  • igvf:corces_measurementSet_RP006_G1_ATAC
Ryan Corces, Gladstone Institute UCSF