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IGVFDS4146ZPMG

released
File Set Type
experimental data
Summary
single-cell ATAC-seq (SHARE-seq)
Assay Term
single-cell ATAC-seq
Sample Summaries
  • bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (29 years)
Protocols
Aliases
bradley-bernstein:scATAC Lib 33
buenrostro-bernstein:scATAC Lib 33

Sequencing Results (Illumina)

16 items
fastq
reads
R2
1439
80 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2397
374 MB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1727
82 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2589
370 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1727
38 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
1631
76 KB
Jason Buenrostro, Broad
validated
fastq
reads
R2
2301
638 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
1535
40 KB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2301
372 MB
Jason Buenrostro, Broad
validated
fastq
reads
R1
2493
372 MB
Jason Buenrostro, Broad
validated

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 6), male, Homo sapiens (29 years)

Donors

1 item
Accession
Aliases
Sex
Taxa
  • bradley-bernstein:Donor 1509
  • buenrostro-bernstein:Donor 1509
male
Homo sapiens

File Sets Using This Measurement Set as an Input

1 item
Accession
Type
Summary
Aliases
Lab
AnalysisSet
SHARE-seq: fragments, sparse gene count matrix
  • buenrostro-bernstein:human-bone-marrow-analysis-set
Jason Buenrostro, Broad

Related Multiome Datasets

1 item
Accession
Type
Summary
Aliases
Lab
MeasurementSet
single-cell RNA sequencing assay (SHARE-seq)
  • bradley-bernstein:scRNA Lib 33
  • buenrostro-bernstein:scRNA Lib 33
Jason Buenrostro, Broad

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad