{
"@context": "/terms/",
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"FileSet",
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],
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],
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],
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"term_name": "single-cell ATAC-seq"
},
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{
"category": "missing publication",
"detail": "Measurement set [IGVFDS4124BSHW](/measurement-sets/IGVFDS4124BSHW/) has no `publications`. Released and archived file sets are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_file_set_missing_publication",
"path": "/measurement-sets/IGVFDS4124BSHW/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS4124BSHW](/measurement-sets/IGVFDS4124BSHW/) has in progress subobject tabular file [IGVFFI5586QIXE](/tabular-files/IGVFFI5586QIXE/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS4124BSHW/"
},
{
"category": "mismatched status",
"detail": "Released measurement set [IGVFDS4124BSHW](/measurement-sets/IGVFDS4124BSHW/) has in progress subobject tabular file [IGVFFI0400MBIM](/tabular-files/IGVFFI0400MBIM/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/measurement-sets/IGVFDS4124BSHW/"
},
{
"category": "missing publication",
"detail": "In vitro system [IGVFSM1100PPNI](/in-vitro-systems/IGVFSM1100PPNI/) has no `publications`. Released and archived samples are expected to be associated with a publication.",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_sample_missing_publication",
"path": "/in-vitro-systems/IGVFSM1100PPNI/"
}
],
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{
"category": "missing strand specificity",
"detail": "Measurement set [IGVFDS4124BSHW](/measurement-sets/IGVFDS4124BSHW/) is missing required `strand_specificity`. Single-cell assays are expected to specify strand specificity.",
"level": 50,
"level_name": "NOT_COMPLIANT",
"name": "audit_missing_strand_specificity",
"path": "/measurement-sets/IGVFDS4124BSHW/"
}
]
},
"award": {
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"contact_pi": {
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"title": "Jason Buenrostro"
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"title": "A foundational resource of functional elements, TF footprints and gene regulatory interactions"
},
"control_for": [],
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"creation_timestamp": "2024-08-20T14:58:24.798687+00:00",
"data_use_limitation_summaries": [
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{
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{
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{
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{
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},
{
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{
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{
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{
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},
{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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},
{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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},
{
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{
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{
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{
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},
{
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},
{
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},
{
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{
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{
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},
{
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},
{
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},
{
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{
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{
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{
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},
{
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"taxa": "Homo sapiens"
},
{
"@id": "/human-donors/IGVFDO5150ROJL/",
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},
{
"@id": "/human-donors/IGVFDO0948FTCE/",
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},
{
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},
{
"@id": "/human-donors/IGVFDO4283QEWA/",
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},
{
"@id": "/human-donors/IGVFDO5046RYOV/",
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},
{
"@id": "/human-donors/IGVFDO9261YIGN/",
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{
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{
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{
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{
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{
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],
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{
"@id": "/sample-terms/EFO_0004905/",
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"Item"
],
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"summary": "induced pluripotent stem cell",
"term_name": "induced pluripotent stem cell"
}
],
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"summary": "Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 205)",
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"term_name": "neural progenitor cell"
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"title": "Siddarth Wekhande"
},
"submitted_files_timestamp": "2024-08-20T15:09:14.563583+00:00",
"summary": "single-cell ATAC-seq (SHARE-seq)",
"uuid": "fa5090b5-5049-4d65-b5b5-5540de3341ac"
}